Top 10 genes with highest correlation to Rv1911c/lppC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1664/pks9 | (cc=0.5326) | info on Rv1664/pks9 |
| Rv1947/- | (cc=0.5261) | info on Rv1947/- |
| Rv0582/vapC26 | (cc=0.5036) | info on Rv0582/vapC26 |
| Rv2345/- | (cc=0.4809) | info on Rv2345/- |
| Rv2390c/- | (cc=0.4733) | info on Rv2390c/- |
| Rv2791c/- | (cc=0.4693) | info on Rv2791c/- |
| Rv1176c/- | (cc=0.4633) | info on Rv1176c/- |
| Rv3305c/amiA1 | (cc=0.457) | info on Rv3305c/amiA1 |
| Rv3116/moeB2 | (cc=0.4544) | info on Rv3116/moeB2 |
| Rv1488/- | (cc=0.4502) | info on Rv1488/- |
Correlation of Rv1911c/lppC with Rv3305c/amiA1
Normalized LFCs for Rv1911c/lppC:
(description and provenance of datasets)
| Rv1911c/lppC | Rv3305c/amiA1 | |
| Fe_supp_jason_reseq | 0.911 | -1.711 |
| low_pH_jason_reseq | -1.978 | -2.014 |
| NO_jason_reseq | 0.189 | -0.454 |
| B6_jason_reseq | 0.318 | -1.483 |
| MHCII_jason_reseq | 0.093 | 0.372 |
| Isoniazid02 | -2.306 | -1.007 |
| Rifampicin4 | 0.677 | 0.062 |
| Ethambutol3 | -1.944 | -0.337 |
| Meropenem3 | -2.187 | -1.118 |
| Vancomycin16 | -0.47 | -1.374 |
| Rv2680_day32 | 0.031 | 0.595 |
| H37Rv_KO_MarP | -0.272 | -0.449 |
| hypoxia_3wks | 0.467 | -1.252 |
| hypoxia_6wks | -0.879 | 0.814 |
| glycerol | -0.08 | 2.099 |
| cholesterol | 0.127 | 1.663 |
| AJ | -0.866 | 0.255 |
| Bibs02 | -0.123 | 1.099 |
| Bibs02c | -0.941 | -0.55 |
| BL6 | -0.12 | 0.882 |
| BL6a | 0.399 | 0.0 |
| BXD01 | -0.088 | 1.316 |
| BXD010 | -0.996 | -0.337 |
| BXD011 | 0.215 | 0.226 |
| BXD03 | 0.75 | 0.657 |
| BXD04 | 0.063 | 1.303 |
| BXD05 | 0.725 | 0.78 |
| BXD06 | 0.75 | 0.941 |
| BXD07 | 0.203 | 0.456 |
| BXD08 | 0.587 | 1.626 |
| BXD09 | 0.632 | 0.614 |
| CAST | 0.512 | 0.172 |
| CCcont | -0.23 | 2.22 |
| DS01 | -0.63 | 0.778 |
| DS02 | -1.752 | -0.922 |
| DS04 | -0.55 | 1.036 |
| DS0c | -0.891 | 0.313 |
| GP01 | 1.112 | 0.527 |
| GP02 | -1.084 | -0.705 |
| GP0c | -0.325 | 0.231 |
| NOD | -1.15 | 0.324 |
| NZO | -1.065 | -0.733 |
| PWK | 0.287 | -0.242 |
| H37Rv_KO_CtpC | 0.54 | 0.79 |
| H37Rv_KO_CtpD | 1.131 | 1.37 |
| H37Rv_KO_Rv1272 | 1.898 | 1.885 |
| H37Rv_KO_SugABC | 0.178 | 0.956 |
| H37Rv_KO_MbtN | -0.921 | 0.747 |
| Trans05 | 0.434 | 1.413 |
| macrophage_unactivated | -0.767 | 1.613 |
| IL1 | 0.065 | 0.107 |
| Rapamycin | 0.393 | 0.988 |
| Tcell | -0.541 | 1.323 |
| GMCSF | 0.367 | 1.669 |
| IFNab | 0.166 | -0.112 |
| IFNg | -0.615 | -0.299 |
| IFNg_GMCSF1 | -0.141 | 0.0 |
| Rv1432_day32 | 0.776 | 0.117 |
| Rv1565c_day32 | 0.809 | 1.039 |
| secA2_input | 0.348 | -1.781 |
| delta_Rv3594 | -0.289 | 1.173 |
| delta_Rv3717 | -0.034 | 0.593 |
| delta_Rv3811 | -0.686 | 0.561 |
| delta_Rv0954 | -0.525 | -0.067 |
| PonA1 | -0.165 | 0.085 |
| EccD1_KO | -1.832 | -0.477 |
| EspI_KO | -1.209 | -0.174 |
| PE35_KO | -0.589 | -0.554 |
| PPE68_KO | -0.896 | -1.84 |
| glycerol2 | -0.873 | 0.252 |
| lignocerate | -0.997 | -0.387 |
| oleate | -0.064 | -1.229 |
| phosphatidylcholine | -0.602 | -1.535 |
| acetate | -1.637 | -1.006 |
| glucAc | -1.359 | -1.159 |
| Rv0950ko | -2.096 | -1.155 |
| Rv1096ko | -2.096 | -0.148 |
| Rv3684ko | -0.966 | -1.153 |
| delta_otsA_trehalose | 0.965 | 1.247 |