Top 10 genes with highest correlation to Rv1911c/lppC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1664/pks9 | (cc=0.5326) | info on Rv1664/pks9 |
| Rv1947/- | (cc=0.5261) | info on Rv1947/- |
| Rv0582/vapC26 | (cc=0.5036) | info on Rv0582/vapC26 |
| Rv2345/- | (cc=0.4809) | info on Rv2345/- |
| Rv2390c/- | (cc=0.4733) | info on Rv2390c/- |
| Rv2791c/- | (cc=0.4693) | info on Rv2791c/- |
| Rv1176c/- | (cc=0.4633) | info on Rv1176c/- |
| Rv3305c/amiA1 | (cc=0.457) | info on Rv3305c/amiA1 |
| Rv3116/moeB2 | (cc=0.4544) | info on Rv3116/moeB2 |
| Rv1488/- | (cc=0.4502) | info on Rv1488/- |
Correlation of Rv1911c/lppC with Rv2791c/-
Normalized LFCs for Rv1911c/lppC:
(description and provenance of datasets)
| Rv1911c/lppC | Rv2791c/- | |
| Fe_supp_jason_reseq | 0.911 | 1.967 |
| low_pH_jason_reseq | -1.978 | 1.034 |
| NO_jason_reseq | 0.189 | 0.494 |
| B6_jason_reseq | 0.318 | 0.423 |
| MHCII_jason_reseq | 0.093 | 0.322 |
| Isoniazid02 | -2.306 | -2.431 |
| Rifampicin4 | 0.677 | -0.866 |
| Ethambutol3 | -1.944 | -1.862 |
| Meropenem3 | -2.187 | -2.037 |
| Vancomycin16 | -0.47 | -1.979 |
| Rv2680_day32 | 0.031 | -1.325 |
| H37Rv_KO_MarP | -0.272 | 0.0 |
| hypoxia_3wks | 0.467 | 0.73 |
| hypoxia_6wks | -0.879 | 0.428 |
| glycerol | -0.08 | 0.127 |
| cholesterol | 0.127 | 0.528 |
| AJ | -0.866 | -0.324 |
| Bibs02 | -0.123 | -0.717 |
| Bibs02c | -0.941 | -0.045 |
| BL6 | -0.12 | 0.456 |
| BL6a | 0.399 | 0.462 |
| BXD01 | -0.088 | 0.16 |
| BXD010 | -0.996 | 0.827 |
| BXD011 | 0.215 | 1.652 |
| BXD03 | 0.75 | 0.167 |
| BXD04 | 0.063 | 1.258 |
| BXD05 | 0.725 | 0.57 |
| BXD06 | 0.75 | 0.566 |
| BXD07 | 0.203 | 0.505 |
| BXD08 | 0.587 | 0.62 |
| BXD09 | 0.632 | 1.572 |
| CAST | 0.512 | -0.102 |
| CCcont | -0.23 | -0.538 |
| DS01 | -0.63 | -0.85 |
| DS02 | -1.752 | -0.414 |
| DS04 | -0.55 | 0.822 |
| DS0c | -0.891 | -0.53 |
| GP01 | 1.112 | -0.021 |
| GP02 | -1.084 | 0.194 |
| GP0c | -0.325 | 0.348 |
| NOD | -1.15 | 0.675 |
| NZO | -1.065 | 0.394 |
| PWK | 0.287 | 1.4 |
| H37Rv_KO_CtpC | 0.54 | 1.78 |
| H37Rv_KO_CtpD | 1.131 | 1.454 |
| H37Rv_KO_Rv1272 | 1.898 | 0.79 |
| H37Rv_KO_SugABC | 0.178 | -0.022 |
| H37Rv_KO_MbtN | -0.921 | 0.615 |
| Trans05 | 0.434 | 0.082 |
| macrophage_unactivated | -0.767 | -0.527 |
| IL1 | 0.065 | 0.445 |
| Rapamycin | 0.393 | 0.35 |
| Tcell | -0.541 | -0.13 |
| GMCSF | 0.367 | -0.441 |
| IFNab | 0.166 | 0.611 |
| IFNg | -0.615 | -0.216 |
| IFNg_GMCSF1 | -0.141 | 0.182 |
| Rv1432_day32 | 0.776 | 0.186 |
| Rv1565c_day32 | 0.809 | -0.081 |
| secA2_input | 0.348 | 0.744 |
| delta_Rv3594 | -0.289 | -0.228 |
| delta_Rv3717 | -0.034 | -0.63 |
| delta_Rv3811 | -0.686 | -1.144 |
| delta_Rv0954 | -0.525 | -0.083 |
| PonA1 | -0.165 | -1.429 |
| EccD1_KO | -1.832 | 0.155 |
| EspI_KO | -1.209 | 0.328 |
| PE35_KO | -0.589 | 1.316 |
| PPE68_KO | -0.896 | 1.03 |
| glycerol2 | -0.873 | -0.734 |
| lignocerate | -0.997 | -1.192 |
| oleate | -0.064 | 0.086 |
| phosphatidylcholine | -0.602 | -0.317 |
| acetate | -1.637 | -2.251 |
| glucAc | -1.359 | -1.705 |
| Rv0950ko | -2.096 | -0.244 |
| Rv1096ko | -2.096 | 0.507 |
| Rv3684ko | -0.966 | -0.622 |
| delta_otsA_trehalose | 0.965 | 0.876 |