Top 10 genes with highest correlation to Rv1911c/lppC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1664/pks9 | (cc=0.5326) | info on Rv1664/pks9 |
| Rv1947/- | (cc=0.5261) | info on Rv1947/- |
| Rv0582/vapC26 | (cc=0.5036) | info on Rv0582/vapC26 |
| Rv2345/- | (cc=0.4809) | info on Rv2345/- |
| Rv2390c/- | (cc=0.4733) | info on Rv2390c/- |
| Rv2791c/- | (cc=0.4693) | info on Rv2791c/- |
| Rv1176c/- | (cc=0.4633) | info on Rv1176c/- |
| Rv3305c/amiA1 | (cc=0.457) | info on Rv3305c/amiA1 |
| Rv3116/moeB2 | (cc=0.4544) | info on Rv3116/moeB2 |
| Rv1488/- | (cc=0.4502) | info on Rv1488/- |
Correlation of Rv1911c/lppC with Rv1488/-
Normalized LFCs for Rv1911c/lppC:
(description and provenance of datasets)
| Rv1911c/lppC | Rv1488/- | |
| Fe_supp_jason_reseq | 0.911 | 0.177 |
| low_pH_jason_reseq | -1.978 | -1.091 |
| NO_jason_reseq | 0.189 | -0.053 |
| B6_jason_reseq | 0.318 | 0.089 |
| MHCII_jason_reseq | 0.093 | -0.209 |
| Isoniazid02 | -2.306 | -1.899 |
| Rifampicin4 | 0.677 | 0.623 |
| Ethambutol3 | -1.944 | -0.277 |
| Meropenem3 | -2.187 | -0.646 |
| Vancomycin16 | -0.47 | -0.777 |
| Rv2680_day32 | 0.031 | 0.748 |
| H37Rv_KO_MarP | -0.272 | -0.444 |
| hypoxia_3wks | 0.467 | 0.654 |
| hypoxia_6wks | -0.879 | 0.725 |
| glycerol | -0.08 | 0.439 |
| cholesterol | 0.127 | -0.435 |
| AJ | -0.866 | 0.323 |
| Bibs02 | -0.123 | 0.621 |
| Bibs02c | -0.941 | -0.72 |
| BL6 | -0.12 | 0.723 |
| BL6a | 0.399 | 0.276 |
| BXD01 | -0.088 | 0.797 |
| BXD010 | -0.996 | 0.533 |
| BXD011 | 0.215 | 0.6 |
| BXD03 | 0.75 | 0.392 |
| BXD04 | 0.063 | 1.853 |
| BXD05 | 0.725 | 0.724 |
| BXD06 | 0.75 | 0.646 |
| BXD07 | 0.203 | 0.813 |
| BXD08 | 0.587 | 1.419 |
| BXD09 | 0.632 | 0.966 |
| CAST | 0.512 | 0.407 |
| CCcont | -0.23 | -0.018 |
| DS01 | -0.63 | -0.84 |
| DS02 | -1.752 | -0.202 |
| DS04 | -0.55 | 0.721 |
| DS0c | -0.891 | -0.317 |
| GP01 | 1.112 | 0.468 |
| GP02 | -1.084 | 0.659 |
| GP0c | -0.325 | 0.352 |
| NOD | -1.15 | 0.199 |
| NZO | -1.065 | 0.877 |
| PWK | 0.287 | 0.386 |
| H37Rv_KO_CtpC | 0.54 | 0.778 |
| H37Rv_KO_CtpD | 1.131 | 1.127 |
| H37Rv_KO_Rv1272 | 1.898 | 0.943 |
| H37Rv_KO_SugABC | 0.178 | 0.466 |
| H37Rv_KO_MbtN | -0.921 | 0.016 |
| Trans05 | 0.434 | 0.575 |
| macrophage_unactivated | -0.767 | -0.644 |
| IL1 | 0.065 | -0.139 |
| Rapamycin | 0.393 | -0.341 |
| Tcell | -0.541 | -0.029 |
| GMCSF | 0.367 | -0.496 |
| IFNab | 0.166 | -0.215 |
| IFNg | -0.615 | -0.283 |
| IFNg_GMCSF1 | -0.141 | -0.132 |
| Rv1432_day32 | 0.776 | 1.222 |
| Rv1565c_day32 | 0.809 | 0.079 |
| secA2_input | 0.348 | 1.046 |
| delta_Rv3594 | -0.289 | -0.135 |
| delta_Rv3717 | -0.034 | -0.461 |
| delta_Rv3811 | -0.686 | -0.233 |
| delta_Rv0954 | -0.525 | 0.391 |
| PonA1 | -0.165 | -0.403 |
| EccD1_KO | -1.832 | 0.158 |
| EspI_KO | -1.209 | -0.742 |
| PE35_KO | -0.589 | 0.347 |
| PPE68_KO | -0.896 | 0.186 |
| glycerol2 | -0.873 | -0.052 |
| lignocerate | -0.997 | 0.298 |
| oleate | -0.064 | 1.141 |
| phosphatidylcholine | -0.602 | 0.113 |
| acetate | -1.637 | -0.485 |
| glucAc | -1.359 | -0.085 |
| Rv0950ko | -2.096 | 0.492 |
| Rv1096ko | -2.096 | 0.244 |
| Rv3684ko | -0.966 | 0.626 |
| delta_otsA_trehalose | 0.965 | -0.687 |