Top 10 genes with highest correlation to Rv1854c/ndh:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0973c/accA2 | (cc=0.5649) | info on Rv0973c/accA2 |
| Rv2842c/- | (cc=0.5435) | info on Rv2842c/- |
| Rv2374c/hrcA | (cc=0.5417) | info on Rv2374c/hrcA |
| Rv1116/- | (cc=0.54) | info on Rv1116/- |
| Rv1925/fadD31 | (cc=0.5306) | info on Rv1925/fadD31 |
| Rv0055/rpsR1 | (cc=0.5223) | info on Rv0055/rpsR1 |
| Rv2243/fabD | (cc=0.5181) | info on Rv2243/fabD |
| Rv3361c/- | (cc=0.5137) | info on Rv3361c/- |
| Rv3152/nuoH | (cc=0.5104) | info on Rv3152/nuoH |
| Rv3112/moaD1 | (cc=0.504) | info on Rv3112/moaD1 |
Correlation of Rv1854c/ndh with Rv0055/rpsR1
Normalized LFCs for Rv1854c/ndh:
(description and provenance of datasets)
| Rv1854c/ndh | Rv0055/rpsR1 | |
| Fe_supp_jason_reseq | 0.0 | -1.37 |
| low_pH_jason_reseq | 0.694 | 3.369 |
| NO_jason_reseq | -0.69 | 2.57 |
| B6_jason_reseq | -0.292 | -0.657 |
| MHCII_jason_reseq | -0.257 | 1.143 |
| Isoniazid02 | 0.551 | 2.663 |
| Rifampicin4 | 0.0 | 0.902 |
| Ethambutol3 | 0.0 | -0.441 |
| Meropenem3 | 0.454 | 0.763 |
| Vancomycin16 | 0.0 | -0.294 |
| Rv2680_day32 | 0.0 | 0.109 |
| H37Rv_KO_MarP | 0.371 | -1.325 |
| hypoxia_3wks | 0.0 | -0.678 |
| hypoxia_6wks | 0.464 | 0.084 |
| glycerol | 0.0 | 0.97 |
| cholesterol | 0.0 | -0.276 |
| AJ | 0.0 | 0.983 |
| Bibs02 | 0.183 | 0.0 |
| Bibs02c | 0.0 | 0.336 |
| BL6 | 2.702 | 3.526 |
| BL6a | 1.633 | 3.297 |
| BXD01 | 1.985 | 5.013 |
| BXD010 | 2.767 | 4.197 |
| BXD011 | 2.116 | 5.786 |
| BXD03 | 0.75 | 3.889 |
| BXD04 | 1.656 | 6.0 |
| BXD05 | 0.135 | 4.896 |
| BXD06 | 1.934 | 4.527 |
| BXD07 | 0.851 | 4.203 |
| BXD08 | 3.214 | 5.838 |
| BXD09 | 1.998 | 4.442 |
| CAST | 0.0 | 3.287 |
| CCcont | 0.733 | 3.633 |
| DS01 | 0.0 | 1.381 |
| DS02 | 0.0 | 0.181 |
| DS04 | 0.0 | -0.177 |
| DS0c | 0.0 | 0.0 |
| GP01 | 0.0 | -0.188 |
| GP02 | 0.0 | 0.0 |
| GP0c | 0.0 | -0.248 |
| NOD | 0.0 | 3.817 |
| NZO | 0.0 | -0.182 |
| PWK | 0.0 | 3.083 |
| H37Rv_KO_CtpC | 3.466 | 1.611 |
| H37Rv_KO_CtpD | 0.0 | 1.594 |
| H37Rv_KO_Rv1272 | 2.343 | 2.661 |
| H37Rv_KO_SugABC | 0.0 | -0.189 |
| H37Rv_KO_MbtN | 0.506 | 1.153 |
| Trans05 | 1.305 | 3.074 |
| macrophage_unactivated | -1.051 | 0.0 |
| IL1 | 1.293 | -0.54 |
| Rapamycin | 0.129 | -0.077 |
| Tcell | 0.267 | 1.717 |
| GMCSF | -1.172 | -1.677 |
| IFNab | -0.547 | -0.076 |
| IFNg | 0.815 | -1.31 |
| IFNg_GMCSF1 | -1.046 | -2.916 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | -0.415 |
| secA2_input | 1.634 | 0.997 |
| delta_Rv3594 | 0.211 | -0.812 |
| delta_Rv3717 | 1.165 | -4.252 |
| delta_Rv3811 | 0.0 | -0.106 |
| delta_Rv0954 | 0.0 | -4.366 |
| PonA1 | 0.0 | -1.721 |
| EccD1_KO | 0.793 | -2.578 |
| EspI_KO | 1.275 | 0.0 |
| PE35_KO | 0.368 | 0.134 |
| PPE68_KO | 0.403 | 0.941 |
| glycerol2 | 0.0 | 2.948 |
| lignocerate | 0.168 | 3.955 |
| oleate | 0.0 | -1.418 |
| phosphatidylcholine | 0.0 | 3.751 |
| acetate | 0.437 | 4.357 |
| glucAc | 0.501 | 3.813 |
| Rv0950ko | -1.894 | -0.944 |
| Rv1096ko | -1.167 | -1.08 |
| Rv3684ko | 1.428 | 2.391 |
| delta_otsA_trehalose | -0.468 | 0.0 |