Top 10 genes with highest correlation to Rv1853/ureD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3390/lpqD | (cc=0.3735) | info on Rv3390/lpqD |
| Rv2685/arsB1 | (cc=0.3672) | info on Rv2685/arsB1 |
| Rv1964/yrbE3A | (cc=0.3657) | info on Rv1964/yrbE3A |
| Rv2024c/- | (cc=0.3631) | info on Rv2024c/- |
| Rv1816/- | (cc=0.3511) | info on Rv1816/- |
| Rv1130/prpD | (cc=0.3415) | info on Rv1130/prpD |
| Rv1785c/cyp143 | (cc=0.3315) | info on Rv1785c/cyp143 |
| Rv3310/sapM | (cc=0.3297) | info on Rv3310/sapM |
| Rv0348/- | (cc=0.3293) | info on Rv0348/- |
| Rv3016/lpqA | (cc=0.3273) | info on Rv3016/lpqA |
Correlation of Rv1853/ureD with Rv3016/lpqA
Normalized LFCs for Rv1853/ureD:
(description and provenance of datasets)
| Rv1853/ureD | Rv3016/lpqA | |
| Fe_supp_jason_reseq | -0.17 | -1.077 |
| low_pH_jason_reseq | -2.928 | -0.43 |
| NO_jason_reseq | 0.2 | -0.068 |
| B6_jason_reseq | -2.148 | -1.444 |
| MHCII_jason_reseq | -0.327 | -1.914 |
| Isoniazid02 | 0.595 | 0.087 |
| Rifampicin4 | -0.504 | -0.198 |
| Ethambutol3 | 0.089 | 0.277 |
| Meropenem3 | 0.444 | 2.468 |
| Vancomycin16 | 0.316 | -0.287 |
| Rv2680_day32 | 1.313 | -0.452 |
| H37Rv_KO_MarP | 1.01 | -0.078 |
| hypoxia_3wks | -0.929 | 0.128 |
| hypoxia_6wks | -1.455 | -0.069 |
| glycerol | -2.008 | -0.895 |
| cholesterol | -0.922 | -1.184 |
| AJ | -1.477 | -0.361 |
| Bibs02 | -0.25 | -1.131 |
| Bibs02c | -0.668 | 0.614 |
| BL6 | -1.745 | 1.181 |
| BL6a | 0.24 | 0.974 |
| BXD01 | 0.427 | 0.239 |
| BXD010 | -0.175 | 0.142 |
| BXD011 | -0.727 | 0.567 |
| BXD03 | 0.369 | 1.236 |
| BXD04 | -0.746 | 0.65 |
| BXD05 | 0.227 | 0.302 |
| BXD06 | -0.805 | 0.463 |
| BXD07 | -0.132 | 0.681 |
| BXD08 | -0.639 | 0.154 |
| BXD09 | 0.147 | 0.076 |
| CAST | -0.853 | 0.025 |
| CCcont | -1.286 | 0.547 |
| DS01 | -1.205 | -0.642 |
| DS02 | 0.531 | -0.243 |
| DS04 | -2.707 | -0.157 |
| DS0c | -0.486 | -0.872 |
| GP01 | 0.471 | 0.932 |
| GP02 | -1.43 | 0.241 |
| GP0c | -0.262 | -0.372 |
| NOD | -1.146 | -1.113 |
| NZO | -2.783 | -0.644 |
| PWK | 0.139 | -0.59 |
| H37Rv_KO_CtpC | 1.597 | 0.393 |
| H37Rv_KO_CtpD | -1.26 | 0.523 |
| H37Rv_KO_Rv1272 | 2.606 | 1.561 |
| H37Rv_KO_SugABC | -0.535 | 0.987 |
| H37Rv_KO_MbtN | -1.183 | -0.222 |
| Trans05 | 1.548 | 0.879 |
| macrophage_unactivated | -1.105 | 0.647 |
| IL1 | -1.373 | 0.314 |
| Rapamycin | -1.074 | 0.779 |
| Tcell | -0.485 | 0.02 |
| GMCSF | 1.666 | 0.475 |
| IFNab | -0.45 | 0.481 |
| IFNg | 1.382 | 0.297 |
| IFNg_GMCSF1 | 0.735 | 0.798 |
| Rv1432_day32 | 0.0 | -0.433 |
| Rv1565c_day32 | 0.161 | 0.208 |
| secA2_input | 0.562 | 0.38 |
| delta_Rv3594 | -0.997 | 1.017 |
| delta_Rv3717 | 0.116 | 0.254 |
| delta_Rv3811 | 0.73 | 0.787 |
| delta_Rv0954 | 0.474 | 0.373 |
| PonA1 | -0.689 | -0.577 |
| EccD1_KO | 0.306 | 0.714 |
| EspI_KO | -0.285 | 0.311 |
| PE35_KO | -0.248 | 0.907 |
| PPE68_KO | 0.214 | 1.193 |
| glycerol2 | -1.131 | -0.172 |
| lignocerate | 0.035 | 0.045 |
| oleate | -0.574 | -0.125 |
| phosphatidylcholine | 0.041 | 0.095 |
| acetate | 0.564 | -0.386 |
| glucAc | 0.856 | 0.091 |
| Rv0950ko | -1.619 | 0.44 |
| Rv1096ko | 0.582 | 0.042 |
| Rv3684ko | -0.868 | 0.023 |
| delta_otsA_trehalose | 0.877 | 0.615 |