Top 10 genes with highest correlation to Rv1853/ureD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3390/lpqD | (cc=0.3735) | info on Rv3390/lpqD |
| Rv2685/arsB1 | (cc=0.3672) | info on Rv2685/arsB1 |
| Rv1964/yrbE3A | (cc=0.3657) | info on Rv1964/yrbE3A |
| Rv2024c/- | (cc=0.3631) | info on Rv2024c/- |
| Rv1816/- | (cc=0.3511) | info on Rv1816/- |
| Rv1130/prpD | (cc=0.3415) | info on Rv1130/prpD |
| Rv1785c/cyp143 | (cc=0.3315) | info on Rv1785c/cyp143 |
| Rv3310/sapM | (cc=0.3297) | info on Rv3310/sapM |
| Rv0348/- | (cc=0.3293) | info on Rv0348/- |
| Rv3016/lpqA | (cc=0.3273) | info on Rv3016/lpqA |
Correlation of Rv1853/ureD with Rv1964/yrbE3A
Normalized LFCs for Rv1853/ureD:
(description and provenance of datasets)
| Rv1853/ureD | Rv1964/yrbE3A | |
| Fe_supp_jason_reseq | -0.17 | -0.073 |
| low_pH_jason_reseq | -2.928 | -0.617 |
| NO_jason_reseq | 0.2 | -0.462 |
| B6_jason_reseq | -2.148 | -2.076 |
| MHCII_jason_reseq | -0.327 | -0.791 |
| Isoniazid02 | 0.595 | 0.354 |
| Rifampicin4 | -0.504 | 0.761 |
| Ethambutol3 | 0.089 | 0.846 |
| Meropenem3 | 0.444 | 0.583 |
| Vancomycin16 | 0.316 | 0.615 |
| Rv2680_day32 | 1.313 | -1.004 |
| H37Rv_KO_MarP | 1.01 | -0.26 |
| hypoxia_3wks | -0.929 | 0.283 |
| hypoxia_6wks | -1.455 | -0.044 |
| glycerol | -2.008 | -1.295 |
| cholesterol | -0.922 | -0.733 |
| AJ | -1.477 | 0.254 |
| Bibs02 | -0.25 | -0.596 |
| Bibs02c | -0.668 | 0.045 |
| BL6 | -1.745 | 0.527 |
| BL6a | 0.24 | -0.221 |
| BXD01 | 0.427 | -0.106 |
| BXD010 | -0.175 | -0.215 |
| BXD011 | -0.727 | 0.438 |
| BXD03 | 0.369 | 0.712 |
| BXD04 | -0.746 | 0.135 |
| BXD05 | 0.227 | -0.197 |
| BXD06 | -0.805 | 0.097 |
| BXD07 | -0.132 | 0.104 |
| BXD08 | -0.639 | 0.667 |
| BXD09 | 0.147 | -0.095 |
| CAST | -0.853 | -0.966 |
| CCcont | -1.286 | 0.193 |
| DS01 | -1.205 | -0.662 |
| DS02 | 0.531 | -0.422 |
| DS04 | -2.707 | -0.436 |
| DS0c | -0.486 | -0.154 |
| GP01 | 0.471 | 1.515 |
| GP02 | -1.43 | -1.02 |
| GP0c | -0.262 | -0.057 |
| NOD | -1.146 | 0.758 |
| NZO | -2.783 | -0.692 |
| PWK | 0.139 | -0.672 |
| H37Rv_KO_CtpC | 1.597 | 0.933 |
| H37Rv_KO_CtpD | -1.26 | 1.268 |
| H37Rv_KO_Rv1272 | 2.606 | 0.787 |
| H37Rv_KO_SugABC | -0.535 | -1.387 |
| H37Rv_KO_MbtN | -1.183 | 1.105 |
| Trans05 | 1.548 | 0.554 |
| macrophage_unactivated | -1.105 | 0.297 |
| IL1 | -1.373 | -0.383 |
| Rapamycin | -1.074 | -0.04 |
| Tcell | -0.485 | 0.163 |
| GMCSF | 1.666 | 0.28 |
| IFNab | -0.45 | 0.475 |
| IFNg | 1.382 | 1.36 |
| IFNg_GMCSF1 | 0.735 | 0.383 |
| Rv1432_day32 | 0.0 | 0.039 |
| Rv1565c_day32 | 0.161 | -0.272 |
| secA2_input | 0.562 | 0.24 |
| delta_Rv3594 | -0.997 | 0.405 |
| delta_Rv3717 | 0.116 | 0.258 |
| delta_Rv3811 | 0.73 | 0.721 |
| delta_Rv0954 | 0.474 | 0.669 |
| PonA1 | -0.689 | 0.084 |
| EccD1_KO | 0.306 | -0.664 |
| EspI_KO | -0.285 | -0.662 |
| PE35_KO | -0.248 | -0.379 |
| PPE68_KO | 0.214 | -0.31 |
| glycerol2 | -1.131 | 0.153 |
| lignocerate | 0.035 | 0.509 |
| oleate | -0.574 | -0.634 |
| phosphatidylcholine | 0.041 | 0.136 |
| acetate | 0.564 | 1.124 |
| glucAc | 0.856 | 0.876 |
| Rv0950ko | -1.619 | 0.151 |
| Rv1096ko | 0.582 | 0.48 |
| Rv3684ko | -0.868 | 0.888 |
| delta_otsA_trehalose | 0.877 | 0.359 |