Top 10 genes with highest correlation to Rv1853/ureD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3390/lpqD | (cc=0.3735) | info on Rv3390/lpqD |
| Rv2685/arsB1 | (cc=0.3672) | info on Rv2685/arsB1 |
| Rv1964/yrbE3A | (cc=0.3657) | info on Rv1964/yrbE3A |
| Rv2024c/- | (cc=0.3631) | info on Rv2024c/- |
| Rv1816/- | (cc=0.3511) | info on Rv1816/- |
| Rv1130/prpD | (cc=0.3415) | info on Rv1130/prpD |
| Rv1785c/cyp143 | (cc=0.3315) | info on Rv1785c/cyp143 |
| Rv3310/sapM | (cc=0.3297) | info on Rv3310/sapM |
| Rv0348/- | (cc=0.3293) | info on Rv0348/- |
| Rv3016/lpqA | (cc=0.3273) | info on Rv3016/lpqA |
Correlation of Rv1853/ureD with Rv3390/lpqD
Normalized LFCs for Rv1853/ureD:
(description and provenance of datasets)
| Rv1853/ureD | Rv3390/lpqD | |
| Fe_supp_jason_reseq | -0.17 | -0.23 |
| low_pH_jason_reseq | -2.928 | -1.22 |
| NO_jason_reseq | 0.2 | -0.341 |
| B6_jason_reseq | -2.148 | -0.213 |
| MHCII_jason_reseq | -0.327 | -0.257 |
| Isoniazid02 | 0.595 | 0.457 |
| Rifampicin4 | -0.504 | 0.011 |
| Ethambutol3 | 0.089 | 0.074 |
| Meropenem3 | 0.444 | 0.654 |
| Vancomycin16 | 0.316 | 0.119 |
| Rv2680_day32 | 1.313 | 1.066 |
| H37Rv_KO_MarP | 1.01 | 0.395 |
| hypoxia_3wks | -0.929 | -0.347 |
| hypoxia_6wks | -1.455 | -0.411 |
| glycerol | -2.008 | -0.407 |
| cholesterol | -0.922 | -0.02 |
| AJ | -1.477 | 0.136 |
| Bibs02 | -0.25 | 0.322 |
| Bibs02c | -0.668 | -0.003 |
| BL6 | -1.745 | -0.755 |
| BL6a | 0.24 | -0.119 |
| BXD01 | 0.427 | -0.646 |
| BXD010 | -0.175 | -0.19 |
| BXD011 | -0.727 | 0.013 |
| BXD03 | 0.369 | 0.074 |
| BXD04 | -0.746 | -0.068 |
| BXD05 | 0.227 | -0.457 |
| BXD06 | -0.805 | -0.201 |
| BXD07 | -0.132 | -0.313 |
| BXD08 | -0.639 | -0.228 |
| BXD09 | 0.147 | -0.187 |
| CAST | -0.853 | 0.08 |
| CCcont | -1.286 | -0.316 |
| DS01 | -1.205 | 0.181 |
| DS02 | 0.531 | -0.34 |
| DS04 | -2.707 | -0.134 |
| DS0c | -0.486 | 0.148 |
| GP01 | 0.471 | 0.032 |
| GP02 | -1.43 | 0.696 |
| GP0c | -0.262 | -0.519 |
| NOD | -1.146 | -0.495 |
| NZO | -2.783 | -0.142 |
| PWK | 0.139 | 0.463 |
| H37Rv_KO_CtpC | 1.597 | 0.162 |
| H37Rv_KO_CtpD | -1.26 | 0.737 |
| H37Rv_KO_Rv1272 | 2.606 | 0.784 |
| H37Rv_KO_SugABC | -0.535 | -0.314 |
| H37Rv_KO_MbtN | -1.183 | -0.112 |
| Trans05 | 1.548 | 0.391 |
| macrophage_unactivated | -1.105 | 0.331 |
| IL1 | -1.373 | -0.208 |
| Rapamycin | -1.074 | 0.046 |
| Tcell | -0.485 | -0.114 |
| GMCSF | 1.666 | 1.061 |
| IFNab | -0.45 | 0.139 |
| IFNg | 1.382 | 0.059 |
| IFNg_GMCSF1 | 0.735 | 0.578 |
| Rv1432_day32 | 0.0 | 0.567 |
| Rv1565c_day32 | 0.161 | -0.16 |
| secA2_input | 0.562 | -0.056 |
| delta_Rv3594 | -0.997 | 0.017 |
| delta_Rv3717 | 0.116 | -0.396 |
| delta_Rv3811 | 0.73 | -0.367 |
| delta_Rv0954 | 0.474 | 0.081 |
| PonA1 | -0.689 | -0.601 |
| EccD1_KO | 0.306 | -0.349 |
| EspI_KO | -0.285 | -0.55 |
| PE35_KO | -0.248 | -0.309 |
| PPE68_KO | 0.214 | -0.678 |
| glycerol2 | -1.131 | 0.706 |
| lignocerate | 0.035 | 0.605 |
| oleate | -0.574 | 0.447 |
| phosphatidylcholine | 0.041 | 0.451 |
| acetate | 0.564 | 0.229 |
| glucAc | 0.856 | 0.118 |
| Rv0950ko | -1.619 | 0.724 |
| Rv1096ko | 0.582 | 0.148 |
| Rv3684ko | -0.868 | -0.151 |
| delta_otsA_trehalose | 0.877 | 0.45 |