Top 10 genes with highest correlation to Rv1813c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0267/narU | (cc=0.4758) | info on Rv0267/narU |
| Rv2665/- | (cc=0.4609) | info on Rv2665/- |
| Rv0120c/fusA2 | (cc=0.4076) | info on Rv0120c/fusA2 |
| Rv0628c/- | (cc=0.4061) | info on Rv0628c/- |
| Rv3748/- | (cc=0.4048) | info on Rv3748/- |
| Rv2882c/frr | (cc=0.3892) | info on Rv2882c/frr |
| Rv2077c/- | (cc=0.3832) | info on Rv2077c/- |
| Rv0476/- | (cc=0.3827) | info on Rv0476/- |
| Rv0774c/- | (cc=0.382) | info on Rv0774c/- |
| Rv0918/- | (cc=0.3805) | info on Rv0918/- |
Correlation of Rv1813c/- with Rv3748/-
Normalized LFCs for Rv1813c/-:
(description and provenance of datasets)
| Rv1813c/- | Rv3748/- | |
| Fe_supp_jason_reseq | -1.234 | -1.045 |
| low_pH_jason_reseq | -0.95 | -0.038 |
| NO_jason_reseq | -0.517 | -1.985 |
| B6_jason_reseq | -0.745 | -1.097 |
| MHCII_jason_reseq | -0.592 | -0.578 |
| Isoniazid02 | 0.444 | 0.704 |
| Rifampicin4 | 0.853 | 0.336 |
| Ethambutol3 | 0.111 | 0.734 |
| Meropenem3 | 0.135 | 0.343 |
| Vancomycin16 | 0.576 | 0.414 |
| Rv2680_day32 | 1.664 | 2.69 |
| H37Rv_KO_MarP | 0.487 | 0.288 |
| hypoxia_3wks | -0.144 | -0.542 |
| hypoxia_6wks | -0.455 | -0.436 |
| glycerol | -1.208 | -2.319 |
| cholesterol | -0.398 | -1.309 |
| AJ | 0.427 | 0.318 |
| Bibs02 | -0.348 | -0.121 |
| Bibs02c | -0.865 | 1.094 |
| BL6 | 0.425 | -0.776 |
| BL6a | 0.066 | 1.274 |
| BXD01 | -0.187 | -0.277 |
| BXD010 | -0.431 | -0.597 |
| BXD011 | 0.008 | -0.423 |
| BXD03 | -0.657 | -0.365 |
| BXD04 | -0.452 | -0.99 |
| BXD05 | -0.682 | -1.975 |
| BXD06 | -0.425 | -0.269 |
| BXD07 | -0.242 | 0.062 |
| BXD08 | -0.036 | 0.354 |
| BXD09 | 0.471 | -0.331 |
| CAST | 0.562 | -1.208 |
| CCcont | 0.316 | 0.119 |
| DS01 | -0.18 | -0.044 |
| DS02 | 0.085 | 0.827 |
| DS04 | 0.603 | 0.235 |
| DS0c | -1.172 | -0.979 |
| GP01 | -0.262 | -0.489 |
| GP02 | -1.062 | 0.215 |
| GP0c | -0.054 | 1.364 |
| NOD | -0.975 | 0.5 |
| NZO | -0.6 | 0.107 |
| PWK | 0.09 | -0.092 |
| H37Rv_KO_CtpC | 0.271 | 1.278 |
| H37Rv_KO_CtpD | 1.168 | 1.43 |
| H37Rv_KO_Rv1272 | -0.778 | -1.337 |
| H37Rv_KO_SugABC | -1.409 | -0.939 |
| H37Rv_KO_MbtN | -1.012 | 0.424 |
| Trans05 | 0.187 | -1.823 |
| macrophage_unactivated | 0.196 | -0.893 |
| IL1 | -0.276 | -0.353 |
| Rapamycin | -0.405 | -0.868 |
| Tcell | -0.73 | -0.811 |
| GMCSF | -0.734 | 0.325 |
| IFNab | -0.254 | 0.293 |
| IFNg | -0.326 | -1.251 |
| IFNg_GMCSF1 | -1.822 | -0.625 |
| Rv1432_day32 | 0.548 | 1.271 |
| Rv1565c_day32 | 0.755 | 0.777 |
| secA2_input | -0.449 | -0.684 |
| delta_Rv3594 | -0.78 | -2.582 |
| delta_Rv3717 | -0.785 | -2.931 |
| delta_Rv3811 | -0.241 | -2.477 |
| delta_Rv0954 | -0.367 | -2.49 |
| PonA1 | 0.283 | -0.762 |
| EccD1_KO | -1.47 | 0.345 |
| EspI_KO | -1.012 | 1.058 |
| PE35_KO | -1.823 | -0.718 |
| PPE68_KO | -1.51 | -0.678 |
| glycerol2 | 0.212 | 1.171 |
| lignocerate | 0.125 | 1.336 |
| oleate | 0.163 | 0.425 |
| phosphatidylcholine | 0.318 | 1.099 |
| acetate | -0.544 | 1.219 |
| glucAc | -0.381 | 1.197 |
| Rv0950ko | -0.124 | 0.422 |
| Rv1096ko | -0.166 | 0.718 |
| Rv3684ko | -0.563 | 0.874 |
| delta_otsA_trehalose | -0.699 | 0.691 |