Top 10 genes with highest correlation to Rv1813c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0267/narU | (cc=0.4758) | info on Rv0267/narU |
| Rv2665/- | (cc=0.4609) | info on Rv2665/- |
| Rv0120c/fusA2 | (cc=0.4076) | info on Rv0120c/fusA2 |
| Rv0628c/- | (cc=0.4061) | info on Rv0628c/- |
| Rv3748/- | (cc=0.4048) | info on Rv3748/- |
| Rv2882c/frr | (cc=0.3892) | info on Rv2882c/frr |
| Rv2077c/- | (cc=0.3832) | info on Rv2077c/- |
| Rv0476/- | (cc=0.3827) | info on Rv0476/- |
| Rv0774c/- | (cc=0.382) | info on Rv0774c/- |
| Rv0918/- | (cc=0.3805) | info on Rv0918/- |
Correlation of Rv1813c/- with Rv0918/-
Normalized LFCs for Rv1813c/-:
(description and provenance of datasets)
| Rv1813c/- | Rv0918/- | |
| Fe_supp_jason_reseq | -1.234 | -0.019 |
| low_pH_jason_reseq | -0.95 | -1.362 |
| NO_jason_reseq | -0.517 | 0.459 |
| B6_jason_reseq | -0.745 | 0.781 |
| MHCII_jason_reseq | -0.592 | 1.154 |
| Isoniazid02 | 0.444 | 0.112 |
| Rifampicin4 | 0.853 | -0.187 |
| Ethambutol3 | 0.111 | 1.223 |
| Meropenem3 | 0.135 | 0.839 |
| Vancomycin16 | 0.576 | 0.424 |
| Rv2680_day32 | 1.664 | 2.915 |
| H37Rv_KO_MarP | 0.487 | 1.067 |
| hypoxia_3wks | -0.144 | -0.797 |
| hypoxia_6wks | -0.455 | -0.042 |
| glycerol | -1.208 | -0.554 |
| cholesterol | -0.398 | 0.024 |
| AJ | 0.427 | 1.316 |
| Bibs02 | -0.348 | 0.02 |
| Bibs02c | -0.865 | 0.706 |
| BL6 | 0.425 | -0.325 |
| BL6a | 0.066 | 0.376 |
| BXD01 | -0.187 | -0.509 |
| BXD010 | -0.431 | -0.297 |
| BXD011 | 0.008 | -1.106 |
| BXD03 | -0.657 | -0.644 |
| BXD04 | -0.452 | -1.75 |
| BXD05 | -0.682 | -1.395 |
| BXD06 | -0.425 | -0.671 |
| BXD07 | -0.242 | -1.133 |
| BXD08 | -0.036 | -0.183 |
| BXD09 | 0.471 | -0.608 |
| CAST | 0.562 | -0.133 |
| CCcont | 0.316 | -0.571 |
| DS01 | -0.18 | 0.065 |
| DS02 | 0.085 | 0.512 |
| DS04 | 0.603 | 0.607 |
| DS0c | -1.172 | 1.031 |
| GP01 | -0.262 | -2.828 |
| GP02 | -1.062 | -1.939 |
| GP0c | -0.054 | -0.857 |
| NOD | -0.975 | 0.285 |
| NZO | -0.6 | 0.283 |
| PWK | 0.09 | -0.033 |
| H37Rv_KO_CtpC | 0.271 | 0.238 |
| H37Rv_KO_CtpD | 1.168 | -0.796 |
| H37Rv_KO_Rv1272 | -0.778 | -0.397 |
| H37Rv_KO_SugABC | -1.409 | -1.469 |
| H37Rv_KO_MbtN | -1.012 | -0.42 |
| Trans05 | 0.187 | -0.428 |
| macrophage_unactivated | 0.196 | -1.341 |
| IL1 | -0.276 | -0.151 |
| Rapamycin | -0.405 | -1.065 |
| Tcell | -0.73 | -1.342 |
| GMCSF | -0.734 | 0.605 |
| IFNab | -0.254 | -0.898 |
| IFNg | -0.326 | -1.355 |
| IFNg_GMCSF1 | -1.822 | -0.531 |
| Rv1432_day32 | 0.548 | 0.692 |
| Rv1565c_day32 | 0.755 | -1.136 |
| secA2_input | -0.449 | -0.955 |
| delta_Rv3594 | -0.78 | -0.561 |
| delta_Rv3717 | -0.785 | 0.466 |
| delta_Rv3811 | -0.241 | 0.474 |
| delta_Rv0954 | -0.367 | -0.557 |
| PonA1 | 0.283 | 1.163 |
| EccD1_KO | -1.47 | -1.187 |
| EspI_KO | -1.012 | -2.028 |
| PE35_KO | -1.823 | -1.762 |
| PPE68_KO | -1.51 | -2.176 |
| glycerol2 | 0.212 | -0.39 |
| lignocerate | 0.125 | 0.0 |
| oleate | 0.163 | -0.109 |
| phosphatidylcholine | 0.318 | -0.297 |
| acetate | -0.544 | -0.52 |
| glucAc | -0.381 | 0.224 |
| Rv0950ko | -0.124 | 0.169 |
| Rv1096ko | -0.166 | 1.098 |
| Rv3684ko | -0.563 | 0.734 |
| delta_otsA_trehalose | -0.699 | 0.66 |