Top 10 genes with highest correlation to Rv1813c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0267/narU | (cc=0.4758) | info on Rv0267/narU |
| Rv2665/- | (cc=0.4609) | info on Rv2665/- |
| Rv0120c/fusA2 | (cc=0.4076) | info on Rv0120c/fusA2 |
| Rv0628c/- | (cc=0.4061) | info on Rv0628c/- |
| Rv3748/- | (cc=0.4048) | info on Rv3748/- |
| Rv2882c/frr | (cc=0.3892) | info on Rv2882c/frr |
| Rv2077c/- | (cc=0.3832) | info on Rv2077c/- |
| Rv0476/- | (cc=0.3827) | info on Rv0476/- |
| Rv0774c/- | (cc=0.382) | info on Rv0774c/- |
| Rv0918/- | (cc=0.3805) | info on Rv0918/- |
Correlation of Rv1813c/- with Rv2882c/frr
Normalized LFCs for Rv1813c/-:
(description and provenance of datasets)
| Rv1813c/- | Rv2882c/frr | |
| Fe_supp_jason_reseq | -1.234 | 0.0 |
| low_pH_jason_reseq | -0.95 | 0.0 |
| NO_jason_reseq | -0.517 | 0.0 |
| B6_jason_reseq | -0.745 | 0.0 |
| MHCII_jason_reseq | -0.592 | 0.0 |
| Isoniazid02 | 0.444 | -0.201 |
| Rifampicin4 | 0.853 | 0.341 |
| Ethambutol3 | 0.111 | 0.293 |
| Meropenem3 | 0.135 | 0.0 |
| Vancomycin16 | 0.576 | 0.923 |
| Rv2680_day32 | 1.664 | 0.0 |
| H37Rv_KO_MarP | 0.487 | 0.371 |
| hypoxia_3wks | -0.144 | 0.0 |
| hypoxia_6wks | -0.455 | 0.0 |
| glycerol | -1.208 | -0.202 |
| cholesterol | -0.398 | -0.145 |
| AJ | 0.427 | 0.212 |
| Bibs02 | -0.348 | -0.183 |
| Bibs02c | -0.865 | 0.527 |
| BL6 | 0.425 | -0.125 |
| BL6a | 0.066 | -0.198 |
| BXD01 | -0.187 | -0.13 |
| BXD010 | -0.431 | -0.128 |
| BXD011 | 0.008 | -0.127 |
| BXD03 | -0.657 | 0.0 |
| BXD04 | -0.452 | -0.124 |
| BXD05 | -0.682 | -0.135 |
| BXD06 | -0.425 | 0.762 |
| BXD07 | -0.242 | -0.138 |
| BXD08 | -0.036 | -0.133 |
| BXD09 | 0.471 | -0.14 |
| CAST | 0.562 | -0.23 |
| CCcont | 0.316 | -0.149 |
| DS01 | -0.18 | -0.236 |
| DS02 | 0.085 | -0.217 |
| DS04 | 0.603 | -0.194 |
| DS0c | -1.172 | 0.0 |
| GP01 | -0.262 | -0.099 |
| GP02 | -1.062 | -0.083 |
| GP0c | -0.054 | -0.13 |
| NOD | -0.975 | -0.225 |
| NZO | -0.6 | 0.182 |
| PWK | 0.09 | 1.009 |
| H37Rv_KO_CtpC | 0.271 | -0.162 |
| H37Rv_KO_CtpD | 1.168 | -0.127 |
| H37Rv_KO_Rv1272 | -0.778 | -0.141 |
| H37Rv_KO_SugABC | -1.409 | -0.099 |
| H37Rv_KO_MbtN | -1.012 | -0.103 |
| Trans05 | 0.187 | -0.131 |
| macrophage_unactivated | 0.196 | 0.0 |
| IL1 | -0.276 | 0.0 |
| Rapamycin | -0.405 | 0.0 |
| Tcell | -0.73 | 0.0 |
| GMCSF | -0.734 | 0.0 |
| IFNab | -0.254 | 0.0 |
| IFNg | -0.326 | 0.0 |
| IFNg_GMCSF1 | -1.822 | 0.0 |
| Rv1432_day32 | 0.548 | 0.0 |
| Rv1565c_day32 | 0.755 | 0.0 |
| secA2_input | -0.449 | 0.568 |
| delta_Rv3594 | -0.78 | -0.176 |
| delta_Rv3717 | -0.785 | -0.477 |
| delta_Rv3811 | -0.241 | -0.564 |
| delta_Rv0954 | -0.367 | -0.49 |
| PonA1 | 0.283 | -0.437 |
| EccD1_KO | -1.47 | -2.519 |
| EspI_KO | -1.012 | -2.185 |
| PE35_KO | -1.823 | -2.234 |
| PPE68_KO | -1.51 | -2.451 |
| glycerol2 | 0.212 | 0.0 |
| lignocerate | 0.125 | 0.0 |
| oleate | 0.163 | 0.0 |
| phosphatidylcholine | 0.318 | 0.0 |
| acetate | -0.544 | 0.0 |
| glucAc | -0.381 | 0.0 |
| Rv0950ko | -0.124 | 1.462 |
| Rv1096ko | -0.166 | 1.143 |
| Rv3684ko | -0.563 | 0.0 |
| delta_otsA_trehalose | -0.699 | 0.0 |