Top 10 genes with highest correlation to Rv1813c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0267/narU | (cc=0.4758) | info on Rv0267/narU |
| Rv2665/- | (cc=0.4609) | info on Rv2665/- |
| Rv0120c/fusA2 | (cc=0.4076) | info on Rv0120c/fusA2 |
| Rv0628c/- | (cc=0.4061) | info on Rv0628c/- |
| Rv3748/- | (cc=0.4048) | info on Rv3748/- |
| Rv2882c/frr | (cc=0.3892) | info on Rv2882c/frr |
| Rv2077c/- | (cc=0.3832) | info on Rv2077c/- |
| Rv0476/- | (cc=0.3827) | info on Rv0476/- |
| Rv0774c/- | (cc=0.382) | info on Rv0774c/- |
| Rv0918/- | (cc=0.3805) | info on Rv0918/- |
Correlation of Rv1813c/- with Rv0476/-
Normalized LFCs for Rv1813c/-:
(description and provenance of datasets)
| Rv1813c/- | Rv0476/- | |
| Fe_supp_jason_reseq | -1.234 | -0.401 |
| low_pH_jason_reseq | -0.95 | -0.773 |
| NO_jason_reseq | -0.517 | 0.092 |
| B6_jason_reseq | -0.745 | -1.211 |
| MHCII_jason_reseq | -0.592 | 0.065 |
| Isoniazid02 | 0.444 | 0.955 |
| Rifampicin4 | 0.853 | 0.736 |
| Ethambutol3 | 0.111 | 1.192 |
| Meropenem3 | 0.135 | 1.353 |
| Vancomycin16 | 0.576 | 0.722 |
| Rv2680_day32 | 1.664 | 1.297 |
| H37Rv_KO_MarP | 0.487 | -1.099 |
| hypoxia_3wks | -0.144 | 1.105 |
| hypoxia_6wks | -0.455 | 1.117 |
| glycerol | -1.208 | -2.055 |
| cholesterol | -0.398 | -1.374 |
| AJ | 0.427 | -0.376 |
| Bibs02 | -0.348 | -0.411 |
| Bibs02c | -0.865 | -1.184 |
| BL6 | 0.425 | -0.434 |
| BL6a | 0.066 | -0.535 |
| BXD01 | -0.187 | 0.481 |
| BXD010 | -0.431 | 0.742 |
| BXD011 | 0.008 | 0.567 |
| BXD03 | -0.657 | 0.28 |
| BXD04 | -0.452 | 0.913 |
| BXD05 | -0.682 | 0.417 |
| BXD06 | -0.425 | 0.391 |
| BXD07 | -0.242 | 0.877 |
| BXD08 | -0.036 | 0.675 |
| BXD09 | 0.471 | 0.248 |
| CAST | 0.562 | -1.175 |
| CCcont | 0.316 | 0.057 |
| DS01 | -0.18 | 0.05 |
| DS02 | 0.085 | -0.213 |
| DS04 | 0.603 | 0.624 |
| DS0c | -1.172 | -0.561 |
| GP01 | -0.262 | 0.17 |
| GP02 | -1.062 | 0.266 |
| GP0c | -0.054 | 0.633 |
| NOD | -0.975 | 0.392 |
| NZO | -0.6 | 0.5 |
| PWK | 0.09 | -0.036 |
| H37Rv_KO_CtpC | 0.271 | -0.065 |
| H37Rv_KO_CtpD | 1.168 | 0.833 |
| H37Rv_KO_Rv1272 | -0.778 | 0.087 |
| H37Rv_KO_SugABC | -1.409 | 0.658 |
| H37Rv_KO_MbtN | -1.012 | 1.183 |
| Trans05 | 0.187 | 0.228 |
| macrophage_unactivated | 0.196 | 0.312 |
| IL1 | -0.276 | -0.967 |
| Rapamycin | -0.405 | -0.184 |
| Tcell | -0.73 | -0.244 |
| GMCSF | -0.734 | 0.211 |
| IFNab | -0.254 | 0.84 |
| IFNg | -0.326 | 0.708 |
| IFNg_GMCSF1 | -1.822 | 0.06 |
| Rv1432_day32 | 0.548 | 1.622 |
| Rv1565c_day32 | 0.755 | -0.295 |
| secA2_input | -0.449 | -1.035 |
| delta_Rv3594 | -0.78 | -0.318 |
| delta_Rv3717 | -0.785 | 0.38 |
| delta_Rv3811 | -0.241 | 0.489 |
| delta_Rv0954 | -0.367 | -0.881 |
| PonA1 | 0.283 | -0.275 |
| EccD1_KO | -1.47 | -1.496 |
| EspI_KO | -1.012 | -0.299 |
| PE35_KO | -1.823 | -1.423 |
| PPE68_KO | -1.51 | -0.995 |
| glycerol2 | 0.212 | 2.023 |
| lignocerate | 0.125 | 0.267 |
| oleate | 0.163 | 2.439 |
| phosphatidylcholine | 0.318 | 0.097 |
| acetate | -0.544 | -0.04 |
| glucAc | -0.381 | -0.154 |
| Rv0950ko | -0.124 | -0.413 |
| Rv1096ko | -0.166 | -0.929 |
| Rv3684ko | -0.563 | -0.38 |
| delta_otsA_trehalose | -0.699 | -0.738 |