Top 10 genes with highest correlation to Rv1793/esxN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1405c/- | (cc=0.5937) | info on Rv1405c/- |
| Rv2606c/snzP | (cc=0.5901) | info on Rv2606c/snzP |
| Rv1791/PE19 | (cc=0.5789) | info on Rv1791/PE19 |
| Rv1790/PPE27 | (cc=0.5777) | info on Rv1790/PPE27 |
| Rv1273c/- | (cc=0.5692) | info on Rv1273c/- |
| Rv3559c/- | (cc=0.5637) | info on Rv3559c/- |
| Rv3616c/espA | (cc=0.5632) | info on Rv3616c/espA |
| Rv1589/bioB | (cc=0.5603) | info on Rv1589/bioB |
| Rv1065/- | (cc=0.559) | info on Rv1065/- |
| Rv1568/bioA | (cc=0.5564) | info on Rv1568/bioA |
Correlation of Rv1793/esxN with Rv1065/-
Normalized LFCs for Rv1793/esxN:
(description and provenance of datasets)
| Rv1793/esxN | Rv1065/- | |
| Fe_supp_jason_reseq | -0.995 | -0.085 |
| low_pH_jason_reseq | -0.656 | -0.773 |
| NO_jason_reseq | 0.882 | -0.16 |
| B6_jason_reseq | -3.145 | -3.079 |
| MHCII_jason_reseq | -3.809 | -2.083 |
| Isoniazid02 | 2.89 | -0.007 |
| Rifampicin4 | -0.937 | 0.014 |
| Ethambutol3 | 0.339 | 1.204 |
| Meropenem3 | 2.227 | 0.272 |
| Vancomycin16 | -0.05 | -0.167 |
| Rv2680_day32 | -0.534 | -0.561 |
| H37Rv_KO_MarP | 0.435 | 0.113 |
| hypoxia_3wks | -0.59 | 0.191 |
| hypoxia_6wks | -0.704 | -0.228 |
| glycerol | 0.462 | 0.268 |
| cholesterol | -1.02 | -1.007 |
| AJ | -1.588 | -1.382 |
| Bibs02 | -0.513 | -2.387 |
| Bibs02c | -2.046 | -2.102 |
| BL6 | -2.596 | -0.413 |
| BL6a | -3.372 | -1.652 |
| BXD01 | -1.81 | -1.005 |
| BXD010 | -2.249 | -1.373 |
| BXD011 | 0.923 | -0.676 |
| BXD03 | -2.452 | -0.576 |
| BXD04 | 0.391 | -0.736 |
| BXD05 | -2.291 | -0.852 |
| BXD06 | -2.344 | -1.101 |
| BXD07 | -2.156 | -1.261 |
| BXD08 | -0.504 | -1.365 |
| BXD09 | -1.899 | -1.239 |
| CAST | -2.508 | -2.364 |
| CCcont | -0.399 | -0.674 |
| DS01 | -2.785 | -3.374 |
| DS02 | -3.486 | -1.344 |
| DS04 | -1.144 | -3.485 |
| DS0c | -5.264 | -2.863 |
| GP01 | 1.355 | 0.052 |
| GP02 | 0.729 | 0.431 |
| GP0c | 0.62 | 0.084 |
| NOD | -3.121 | -2.184 |
| NZO | -0.481 | -0.825 |
| PWK | -1.503 | -1.272 |
| H37Rv_KO_CtpC | -0.016 | -0.967 |
| H37Rv_KO_CtpD | -1.664 | -0.999 |
| H37Rv_KO_Rv1272 | -1.905 | -0.61 |
| H37Rv_KO_SugABC | -1.855 | -0.705 |
| H37Rv_KO_MbtN | 1.092 | -0.452 |
| Trans05 | -2.369 | -0.416 |
| macrophage_unactivated | -0.77 | -0.533 |
| IL1 | 1.011 | -0.786 |
| Rapamycin | 0.193 | -0.055 |
| Tcell | 2.525 | -0.485 |
| GMCSF | 0.834 | 0.591 |
| IFNab | -1.487 | -0.354 |
| IFNg | 1.649 | -0.69 |
| IFNg_GMCSF1 | -0.101 | -0.386 |
| Rv1432_day32 | -1.609 | -1.091 |
| Rv1565c_day32 | -3.574 | -0.834 |
| secA2_input | -1.493 | 1.032 |
| delta_Rv3594 | -0.47 | -1.017 |
| delta_Rv3717 | -0.849 | -0.296 |
| delta_Rv3811 | 0.634 | -0.219 |
| delta_Rv0954 | -0.727 | -1.353 |
| PonA1 | 0.145 | -0.3 |
| EccD1_KO | -1.536 | -0.25 |
| EspI_KO | -0.853 | 0.043 |
| PE35_KO | -0.913 | -0.292 |
| PPE68_KO | -0.557 | -0.144 |
| glycerol2 | 2.963 | -0.149 |
| lignocerate | 0.095 | -0.032 |
| oleate | 0.411 | 0.128 |
| phosphatidylcholine | 0.109 | 0.455 |
| acetate | 3.223 | 0.0 |
| glucAc | 3.434 | -0.187 |
| Rv0950ko | 0.305 | -0.087 |
| Rv1096ko | -1.668 | 0.169 |
| Rv3684ko | -2.07 | 0.069 |
| delta_otsA_trehalose | -1.521 | -0.524 |