Top 10 genes with highest correlation to Rv1777/cyp144:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1267c/embR | (cc=0.5251) | info on Rv1267c/embR |
| Rv1374c/- | (cc=0.5156) | info on Rv1374c/- |
| Rv1989c/- | (cc=0.4945) | info on Rv1989c/- |
| Rv1735c/- | (cc=0.4646) | info on Rv1735c/- |
| Rv2030c/- | (cc=0.43) | info on Rv2030c/- |
| Rv3395A/- | (cc=0.428) | info on Rv3395A/- |
| Rv0564c/gpdA1 | (cc=0.4267) | info on Rv0564c/gpdA1 |
| Rv1467c/fadE15 | (cc=0.4254) | info on Rv1467c/fadE15 |
| Rv3059/cyp136 | (cc=0.4215) | info on Rv3059/cyp136 |
| Rv2086/- | (cc=0.4194) | info on Rv2086/- |
Correlation of Rv1777/cyp144 with Rv3395A/-
Normalized LFCs for Rv1777/cyp144:
(description and provenance of datasets)
| Rv1777/cyp144 | Rv3395A/- | |
| Fe_supp_jason_reseq | -0.68 | 0.734 |
| low_pH_jason_reseq | 0.586 | -0.201 |
| NO_jason_reseq | 1.113 | 0.291 |
| B6_jason_reseq | -0.391 | 0.377 |
| MHCII_jason_reseq | 0.352 | 0.695 |
| Isoniazid02 | 0.496 | 2.447 |
| Rifampicin4 | 0.677 | 0.041 |
| Ethambutol3 | 0.185 | 2.29 |
| Meropenem3 | 0.347 | 4.713 |
| Vancomycin16 | 0.517 | -0.162 |
| Rv2680_day32 | 0.444 | -0.192 |
| H37Rv_KO_MarP | 0.186 | -0.247 |
| hypoxia_3wks | -0.279 | -0.359 |
| hypoxia_6wks | -1.004 | -1.222 |
| glycerol | -1.083 | -3.474 |
| cholesterol | -1.633 | -1.141 |
| AJ | 0.113 | -0.18 |
| Bibs02 | -0.607 | -0.707 |
| Bibs02c | 0.015 | 0.105 |
| BL6 | -0.763 | -1.157 |
| BL6a | -0.254 | 0.073 |
| BXD01 | 0.313 | -0.469 |
| BXD010 | -0.134 | -0.807 |
| BXD011 | -0.173 | -0.792 |
| BXD03 | -0.774 | -0.452 |
| BXD04 | 0.761 | -0.242 |
| BXD05 | -0.754 | -0.675 |
| BXD06 | -0.029 | -0.354 |
| BXD07 | 0.058 | -0.803 |
| BXD08 | -0.564 | -1.308 |
| BXD09 | -0.657 | -0.873 |
| CAST | 0.606 | 0.275 |
| CCcont | -0.715 | -0.738 |
| DS01 | -0.103 | 0.13 |
| DS02 | 0.061 | -0.093 |
| DS04 | 0.041 | 0.519 |
| DS0c | 0.852 | -0.214 |
| GP01 | 1.02 | 0.727 |
| GP02 | 1.139 | -0.008 |
| GP0c | 0.737 | -0.594 |
| NOD | 1.01 | 0.68 |
| NZO | -0.272 | -0.227 |
| PWK | 0.082 | 0.226 |
| H37Rv_KO_CtpC | -0.387 | -1.413 |
| H37Rv_KO_CtpD | 0.428 | -0.597 |
| H37Rv_KO_Rv1272 | 0.469 | -0.418 |
| H37Rv_KO_SugABC | 0.441 | -0.281 |
| H37Rv_KO_MbtN | -0.108 | -1.014 |
| Trans05 | -0.359 | -0.129 |
| macrophage_unactivated | 0.139 | -0.325 |
| IL1 | 0.214 | -0.89 |
| Rapamycin | 0.135 | -1.2 |
| Tcell | 0.668 | -0.87 |
| GMCSF | -0.325 | -1.032 |
| IFNab | -0.995 | -1.255 |
| IFNg | -0.371 | -1.173 |
| IFNg_GMCSF1 | -0.864 | -0.572 |
| Rv1432_day32 | 0.009 | 1.027 |
| Rv1565c_day32 | 0.24 | -0.788 |
| secA2_input | -0.905 | -0.553 |
| delta_Rv3594 | 0.223 | -1.182 |
| delta_Rv3717 | 0.201 | -1.258 |
| delta_Rv3811 | 0.506 | -1.019 |
| delta_Rv0954 | 0.359 | 0.045 |
| PonA1 | -0.129 | -0.479 |
| EccD1_KO | 0.401 | -0.441 |
| EspI_KO | -0.046 | -0.134 |
| PE35_KO | 0.397 | -0.102 |
| PPE68_KO | 0.528 | -0.857 |
| glycerol2 | 0.558 | 1.002 |
| lignocerate | 0.666 | 1.508 |
| oleate | 0.376 | 0.203 |
| phosphatidylcholine | 0.857 | 1.144 |
| acetate | 0.113 | 1.398 |
| glucAc | 0.042 | 1.289 |
| Rv0950ko | 0.042 | -0.19 |
| Rv1096ko | 0.612 | 1.252 |
| Rv3684ko | -0.619 | 0.295 |
| delta_otsA_trehalose | 1.04 | 1.284 |