Top 10 genes with highest correlation to Rv1777/cyp144:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1267c/embR | (cc=0.5251) | info on Rv1267c/embR |
| Rv1374c/- | (cc=0.5156) | info on Rv1374c/- |
| Rv1989c/- | (cc=0.4945) | info on Rv1989c/- |
| Rv1735c/- | (cc=0.4646) | info on Rv1735c/- |
| Rv2030c/- | (cc=0.43) | info on Rv2030c/- |
| Rv3395A/- | (cc=0.428) | info on Rv3395A/- |
| Rv0564c/gpdA1 | (cc=0.4267) | info on Rv0564c/gpdA1 |
| Rv1467c/fadE15 | (cc=0.4254) | info on Rv1467c/fadE15 |
| Rv3059/cyp136 | (cc=0.4215) | info on Rv3059/cyp136 |
| Rv2086/- | (cc=0.4194) | info on Rv2086/- |
Correlation of Rv1777/cyp144 with Rv2086/-
Normalized LFCs for Rv1777/cyp144:
(description and provenance of datasets)
| Rv1777/cyp144 | Rv2086/- | |
| Fe_supp_jason_reseq | -0.68 | -3.309 |
| low_pH_jason_reseq | 0.586 | -0.694 |
| NO_jason_reseq | 1.113 | -0.286 |
| B6_jason_reseq | -0.391 | -1.244 |
| MHCII_jason_reseq | 0.352 | -1.023 |
| Isoniazid02 | 0.496 | 0.368 |
| Rifampicin4 | 0.677 | 0.054 |
| Ethambutol3 | 0.185 | 0.406 |
| Meropenem3 | 0.347 | -0.428 |
| Vancomycin16 | 0.517 | 0.398 |
| Rv2680_day32 | 0.444 | 2.066 |
| H37Rv_KO_MarP | 0.186 | -0.409 |
| hypoxia_3wks | -0.279 | -1.049 |
| hypoxia_6wks | -1.004 | -0.616 |
| glycerol | -1.083 | -0.607 |
| cholesterol | -1.633 | 0.435 |
| AJ | 0.113 | -0.644 |
| Bibs02 | -0.607 | -0.065 |
| Bibs02c | 0.015 | -0.58 |
| BL6 | -0.763 | -1.093 |
| BL6a | -0.254 | -1.505 |
| BXD01 | 0.313 | -0.221 |
| BXD010 | -0.134 | -0.76 |
| BXD011 | -0.173 | -0.353 |
| BXD03 | -0.774 | -1.701 |
| BXD04 | 0.761 | 0.063 |
| BXD05 | -0.754 | -1.072 |
| BXD06 | -0.029 | -0.922 |
| BXD07 | 0.058 | -0.517 |
| BXD08 | -0.564 | 0.067 |
| BXD09 | -0.657 | -0.596 |
| CAST | 0.606 | 1.003 |
| CCcont | -0.715 | -0.194 |
| DS01 | -0.103 | -0.71 |
| DS02 | 0.061 | -2.28 |
| DS04 | 0.041 | 1.154 |
| DS0c | 0.852 | 0.0 |
| GP01 | 1.02 | 0.548 |
| GP02 | 1.139 | 1.721 |
| GP0c | 0.737 | 1.753 |
| NOD | 1.01 | 0.586 |
| NZO | -0.272 | -0.952 |
| PWK | 0.082 | 1.006 |
| H37Rv_KO_CtpC | -0.387 | 0.055 |
| H37Rv_KO_CtpD | 0.428 | -1.75 |
| H37Rv_KO_Rv1272 | 0.469 | 0.598 |
| H37Rv_KO_SugABC | 0.441 | -1.583 |
| H37Rv_KO_MbtN | -0.108 | -0.154 |
| Trans05 | -0.359 | 0.584 |
| macrophage_unactivated | 0.139 | -0.805 |
| IL1 | 0.214 | -1.51 |
| Rapamycin | 0.135 | -2.725 |
| Tcell | 0.668 | 0.124 |
| GMCSF | -0.325 | 1.296 |
| IFNab | -0.995 | -0.632 |
| IFNg | -0.371 | -1.513 |
| IFNg_GMCSF1 | -0.864 | -1.103 |
| Rv1432_day32 | 0.009 | 1.269 |
| Rv1565c_day32 | 0.24 | 0.0 |
| secA2_input | -0.905 | -0.875 |
| delta_Rv3594 | 0.223 | -0.644 |
| delta_Rv3717 | 0.201 | -0.849 |
| delta_Rv3811 | 0.506 | 0.125 |
| delta_Rv0954 | 0.359 | -1.226 |
| PonA1 | -0.129 | -0.568 |
| EccD1_KO | 0.401 | 0.224 |
| EspI_KO | -0.046 | -0.821 |
| PE35_KO | 0.397 | 0.198 |
| PPE68_KO | 0.528 | 0.269 |
| glycerol2 | 0.558 | 0.349 |
| lignocerate | 0.666 | 1.062 |
| oleate | 0.376 | -0.38 |
| phosphatidylcholine | 0.857 | 0.381 |
| acetate | 0.113 | 0.667 |
| glucAc | 0.042 | 1.062 |
| Rv0950ko | 0.042 | 0.865 |
| Rv1096ko | 0.612 | 0.986 |
| Rv3684ko | -0.619 | -1.605 |
| delta_otsA_trehalose | 1.04 | 3.188 |