Top 10 genes with highest correlation to Rv1777/cyp144:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1267c/embR | (cc=0.5251) | info on Rv1267c/embR |
| Rv1374c/- | (cc=0.5156) | info on Rv1374c/- |
| Rv1989c/- | (cc=0.4945) | info on Rv1989c/- |
| Rv1735c/- | (cc=0.4646) | info on Rv1735c/- |
| Rv2030c/- | (cc=0.43) | info on Rv2030c/- |
| Rv3395A/- | (cc=0.428) | info on Rv3395A/- |
| Rv0564c/gpdA1 | (cc=0.4267) | info on Rv0564c/gpdA1 |
| Rv1467c/fadE15 | (cc=0.4254) | info on Rv1467c/fadE15 |
| Rv3059/cyp136 | (cc=0.4215) | info on Rv3059/cyp136 |
| Rv2086/- | (cc=0.4194) | info on Rv2086/- |
Correlation of Rv1777/cyp144 with Rv1989c/-
Normalized LFCs for Rv1777/cyp144:
(description and provenance of datasets)
| Rv1777/cyp144 | Rv1989c/- | |
| Fe_supp_jason_reseq | -0.68 | -0.633 |
| low_pH_jason_reseq | 0.586 | -0.243 |
| NO_jason_reseq | 1.113 | 0.446 |
| B6_jason_reseq | -0.391 | 0.514 |
| MHCII_jason_reseq | 0.352 | 0.217 |
| Isoniazid02 | 0.496 | 0.499 |
| Rifampicin4 | 0.677 | -0.915 |
| Ethambutol3 | 0.185 | 0.931 |
| Meropenem3 | 0.347 | -0.738 |
| Vancomycin16 | 0.517 | -0.26 |
| Rv2680_day32 | 0.444 | 0.615 |
| H37Rv_KO_MarP | 0.186 | 0.049 |
| hypoxia_3wks | -0.279 | -0.187 |
| hypoxia_6wks | -1.004 | -0.221 |
| glycerol | -1.083 | -1.791 |
| cholesterol | -1.633 | -0.893 |
| AJ | 0.113 | -0.034 |
| Bibs02 | -0.607 | 0.442 |
| Bibs02c | 0.015 | 0.138 |
| BL6 | -0.763 | -1.171 |
| BL6a | -0.254 | -0.36 |
| BXD01 | 0.313 | -0.451 |
| BXD010 | -0.134 | -1.432 |
| BXD011 | -0.173 | -0.947 |
| BXD03 | -0.774 | -0.586 |
| BXD04 | 0.761 | -0.24 |
| BXD05 | -0.754 | -0.529 |
| BXD06 | -0.029 | -1.085 |
| BXD07 | 0.058 | -0.764 |
| BXD08 | -0.564 | -0.912 |
| BXD09 | -0.657 | -0.975 |
| CAST | 0.606 | -0.087 |
| CCcont | -0.715 | -1.18 |
| DS01 | -0.103 | -0.05 |
| DS02 | 0.061 | 0.314 |
| DS04 | 0.041 | 0.008 |
| DS0c | 0.852 | -0.041 |
| GP01 | 1.02 | 0.022 |
| GP02 | 1.139 | 1.252 |
| GP0c | 0.737 | -0.335 |
| NOD | 1.01 | 0.221 |
| NZO | -0.272 | -0.452 |
| PWK | 0.082 | -0.121 |
| H37Rv_KO_CtpC | -0.387 | -0.824 |
| H37Rv_KO_CtpD | 0.428 | -0.613 |
| H37Rv_KO_Rv1272 | 0.469 | 0.126 |
| H37Rv_KO_SugABC | 0.441 | -0.039 |
| H37Rv_KO_MbtN | -0.108 | 0.025 |
| Trans05 | -0.359 | 0.533 |
| macrophage_unactivated | 0.139 | -0.546 |
| IL1 | 0.214 | -1.056 |
| Rapamycin | 0.135 | -1.114 |
| Tcell | 0.668 | -0.564 |
| GMCSF | -0.325 | -0.826 |
| IFNab | -0.995 | -0.602 |
| IFNg | -0.371 | 0.219 |
| IFNg_GMCSF1 | -0.864 | 0.053 |
| Rv1432_day32 | 0.009 | 0.493 |
| Rv1565c_day32 | 0.24 | 0.548 |
| secA2_input | -0.905 | -0.888 |
| delta_Rv3594 | 0.223 | 0.85 |
| delta_Rv3717 | 0.201 | 0.337 |
| delta_Rv3811 | 0.506 | 0.573 |
| delta_Rv0954 | 0.359 | 0.417 |
| PonA1 | -0.129 | 0.083 |
| EccD1_KO | 0.401 | 0.661 |
| EspI_KO | -0.046 | -0.114 |
| PE35_KO | 0.397 | 0.248 |
| PPE68_KO | 0.528 | -0.128 |
| glycerol2 | 0.558 | 0.083 |
| lignocerate | 0.666 | 0.153 |
| oleate | 0.376 | 0.349 |
| phosphatidylcholine | 0.857 | 0.218 |
| acetate | 0.113 | -0.472 |
| glucAc | 0.042 | -0.616 |
| Rv0950ko | 0.042 | 0.28 |
| Rv1096ko | 0.612 | 0.057 |
| Rv3684ko | -0.619 | -0.377 |
| delta_otsA_trehalose | 1.04 | 1.837 |