Top 10 genes with highest correlation to Rv1766/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1118c/- | (cc=0.5994) | info on Rv1118c/- |
| Rv2566/- | (cc=0.5427) | info on Rv2566/- |
| Rv2359/zur | (cc=0.5425) | info on Rv2359/zur |
| Rv1023/eno | (cc=0.5368) | info on Rv1023/eno |
| Rv1514c/- | (cc=0.5339) | info on Rv1514c/- |
| Rv1746/pknF | (cc=0.5202) | info on Rv1746/pknF |
| Rv1541c/lprI | (cc=0.5194) | info on Rv1541c/lprI |
| Rv1465/- | (cc=0.517) | info on Rv1465/- |
| Rv2599/- | (cc=0.5132) | info on Rv2599/- |
| Rv1647/- | (cc=0.4991) | info on Rv1647/- |
Correlation of Rv1766/- with Rv1118c/-
Normalized LFCs for Rv1766/-:
(description and provenance of datasets)
| Rv1766/- | Rv1118c/- | |
| Fe_supp_jason_reseq | 1.354 | 0.474 |
| low_pH_jason_reseq | 1.517 | 0.0 |
| NO_jason_reseq | 1.536 | -0.131 |
| B6_jason_reseq | 1.781 | 0.31 |
| MHCII_jason_reseq | 2.648 | 1.137 |
| Isoniazid02 | -0.4 | -0.543 |
| Rifampicin4 | -0.42 | -0.631 |
| Ethambutol3 | -0.921 | -0.539 |
| Meropenem3 | -0.128 | -0.331 |
| Vancomycin16 | -1.512 | -0.517 |
| Rv2680_day32 | 0.833 | -0.3 |
| H37Rv_KO_MarP | 0.032 | -0.262 |
| hypoxia_3wks | 0.49 | -0.343 |
| hypoxia_6wks | 1.844 | 0.063 |
| glycerol | -0.489 | 0.417 |
| cholesterol | 0.499 | -0.152 |
| AJ | 0.188 | 0.124 |
| Bibs02 | -2.099 | 0.44 |
| Bibs02c | -0.964 | 0.218 |
| BL6 | -0.922 | 0.211 |
| BL6a | -1.231 | -0.013 |
| BXD01 | -2.305 | -0.859 |
| BXD010 | 0.16 | 0.199 |
| BXD011 | -1.138 | -0.714 |
| BXD03 | -3.057 | -0.743 |
| BXD04 | -1.512 | 0.039 |
| BXD05 | -0.066 | -0.45 |
| BXD06 | -1.685 | -0.719 |
| BXD07 | -1.359 | -0.457 |
| BXD08 | -0.827 | -0.909 |
| BXD09 | -0.474 | -0.339 |
| CAST | -1.018 | 0.022 |
| CCcont | -1.513 | -0.313 |
| DS01 | -0.958 | -0.031 |
| DS02 | -2.834 | -0.197 |
| DS04 | -0.412 | 0.461 |
| DS0c | 0.316 | 0.544 |
| GP01 | 0.046 | -0.271 |
| GP02 | -0.698 | -0.384 |
| GP0c | -0.114 | -0.073 |
| NOD | -1.035 | 0.885 |
| NZO | -2.439 | -0.53 |
| PWK | -0.072 | 0.169 |
| H37Rv_KO_CtpC | 1.897 | 0.242 |
| H37Rv_KO_CtpD | -0.607 | -0.188 |
| H37Rv_KO_Rv1272 | 0.961 | -0.133 |
| H37Rv_KO_SugABC | 0.485 | 0.25 |
| H37Rv_KO_MbtN | 0.128 | 0.519 |
| Trans05 | -1.061 | -0.347 |
| macrophage_unactivated | -2.118 | -0.827 |
| IL1 | -1.836 | -0.46 |
| Rapamycin | 0.203 | -0.153 |
| Tcell | -0.707 | -0.707 |
| GMCSF | -0.275 | 0.114 |
| IFNab | -0.426 | -0.396 |
| IFNg | -0.377 | 0.0 |
| IFNg_GMCSF1 | 0.773 | -0.603 |
| Rv1432_day32 | 1.176 | -0.18 |
| Rv1565c_day32 | -2.504 | 0.18 |
| secA2_input | -0.128 | 0.394 |
| delta_Rv3594 | 1.39 | 0.333 |
| delta_Rv3717 | 1.258 | -0.224 |
| delta_Rv3811 | 1.163 | 0.628 |
| delta_Rv0954 | 1.649 | -0.017 |
| PonA1 | 0.833 | 0.493 |
| EccD1_KO | 3.141 | 0.562 |
| EspI_KO | 3.819 | 1.349 |
| PE35_KO | 4.297 | 1.231 |
| PPE68_KO | 4.54 | 0.627 |
| glycerol2 | 0.555 | 0.3 |
| lignocerate | 1.352 | 0.57 |
| oleate | -1.117 | -0.53 |
| phosphatidylcholine | 1.053 | 0.197 |
| acetate | 2.173 | -0.055 |
| glucAc | 1.966 | 0.161 |
| Rv0950ko | 0.492 | -0.066 |
| Rv1096ko | -1.659 | 0.081 |
| Rv3684ko | -2.26 | -0.242 |
| delta_otsA_trehalose | 1.3 | 1.128 |