Top 10 genes with highest correlation to Rv1754c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2161c/- | (cc=0.4631) | info on Rv2161c/- |
| Rv1785c/cyp143 | (cc=0.4129) | info on Rv1785c/cyp143 |
| Rv0742/PE_PGRS8 | (cc=0.4082) | info on Rv0742/PE_PGRS8 |
| Rv2500c/fadE19 | (cc=0.408) | info on Rv2500c/fadE19 |
| Rv1584c/- | (cc=0.4066) | info on Rv1584c/- |
| Rv3160c/- | (cc=0.4003) | info on Rv3160c/- |
| Rv3826/fadD23 | (cc=0.3982) | info on Rv3826/fadD23 |
| Rv3158/nuoN | (cc=0.3958) | info on Rv3158/nuoN |
| Rv1787/PPE25 | (cc=0.385) | info on Rv1787/PPE25 |
| Rv1770/- | (cc=0.3772) | info on Rv1770/- |
Correlation of Rv1754c/- with Rv3826/fadD23
Normalized LFCs for Rv1754c/-:
(description and provenance of datasets)
| Rv1754c/- | Rv3826/fadD23 | |
| Fe_supp_jason_reseq | 0.011 | 0.117 |
| low_pH_jason_reseq | -0.442 | 0.355 |
| NO_jason_reseq | 0.055 | -0.068 |
| B6_jason_reseq | -0.284 | 0.396 |
| MHCII_jason_reseq | -0.283 | 0.289 |
| Isoniazid02 | 0.69 | -0.093 |
| Rifampicin4 | 3.344 | 1.124 |
| Ethambutol3 | 0.664 | 0.927 |
| Meropenem3 | -0.374 | 0.049 |
| Vancomycin16 | 1.73 | 0.613 |
| Rv2680_day32 | 0.183 | 0.9 |
| H37Rv_KO_MarP | 0.212 | 0.526 |
| hypoxia_3wks | -0.674 | -0.435 |
| hypoxia_6wks | -0.207 | -0.474 |
| glycerol | 0.164 | -0.159 |
| cholesterol | 0.338 | -0.641 |
| AJ | 0.378 | -0.281 |
| Bibs02 | -0.101 | -0.608 |
| Bibs02c | 0.327 | -0.08 |
| BL6 | 0.366 | 0.6 |
| BL6a | 0.425 | 0.145 |
| BXD01 | 0.856 | -0.274 |
| BXD010 | 0.433 | -0.495 |
| BXD011 | 1.18 | 0.071 |
| BXD03 | 0.443 | 0.215 |
| BXD04 | 0.524 | 0.5 |
| BXD05 | 0.166 | -0.558 |
| BXD06 | 0.286 | 0.395 |
| BXD07 | 0.468 | -0.138 |
| BXD08 | 0.699 | -0.375 |
| BXD09 | 0.134 | -0.14 |
| CAST | -0.362 | 0.903 |
| CCcont | 0.497 | -0.212 |
| DS01 | 0.226 | -0.785 |
| DS02 | 0.145 | -1.23 |
| DS04 | -0.091 | -0.804 |
| DS0c | 0.424 | 0.159 |
| GP01 | 0.408 | -0.66 |
| GP02 | 1.011 | -0.587 |
| GP0c | 0.426 | -0.502 |
| NOD | 0.454 | 0.319 |
| NZO | -0.227 | 0.754 |
| PWK | -1.248 | 1.009 |
| H37Rv_KO_CtpC | 0.654 | 0.739 |
| H37Rv_KO_CtpD | 0.838 | 1.446 |
| H37Rv_KO_Rv1272 | 0.794 | 0.079 |
| H37Rv_KO_SugABC | 0.384 | -0.627 |
| H37Rv_KO_MbtN | 0.113 | -0.081 |
| Trans05 | 1.442 | 0.405 |
| macrophage_unactivated | 0.376 | 0.092 |
| IL1 | 0.439 | -0.658 |
| Rapamycin | 0.157 | -0.476 |
| Tcell | 0.834 | 0.0 |
| GMCSF | 0.187 | -0.158 |
| IFNab | 0.302 | -0.777 |
| IFNg | 0.369 | -0.329 |
| IFNg_GMCSF1 | 0.192 | -0.094 |
| Rv1432_day32 | -0.724 | -0.375 |
| Rv1565c_day32 | -1.987 | -3.976 |
| secA2_input | -0.553 | -1.226 |
| delta_Rv3594 | -0.422 | -0.558 |
| delta_Rv3717 | -0.17 | -1.357 |
| delta_Rv3811 | 0.0 | -0.694 |
| delta_Rv0954 | 0.036 | -0.35 |
| PonA1 | -0.638 | -0.044 |
| EccD1_KO | 0.0 | -0.437 |
| EspI_KO | -0.145 | 0.177 |
| PE35_KO | 0.341 | -0.125 |
| PPE68_KO | 0.179 | -0.208 |
| glycerol2 | 0.196 | -1.108 |
| lignocerate | 0.613 | -0.561 |
| oleate | 0.179 | -0.72 |
| phosphatidylcholine | 0.521 | -1.821 |
| acetate | 0.485 | -0.095 |
| glucAc | 0.372 | -0.383 |
| Rv0950ko | -0.178 | 0.537 |
| Rv1096ko | -0.489 | -0.778 |
| Rv3684ko | -0.043 | -1.035 |
| delta_otsA_trehalose | 1.21 | 0.147 |