Top 10 genes with highest correlation to Rv1754c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2161c/- | (cc=0.4631) | info on Rv2161c/- |
| Rv1785c/cyp143 | (cc=0.4129) | info on Rv1785c/cyp143 |
| Rv0742/PE_PGRS8 | (cc=0.4082) | info on Rv0742/PE_PGRS8 |
| Rv2500c/fadE19 | (cc=0.408) | info on Rv2500c/fadE19 |
| Rv1584c/- | (cc=0.4066) | info on Rv1584c/- |
| Rv3160c/- | (cc=0.4003) | info on Rv3160c/- |
| Rv3826/fadD23 | (cc=0.3982) | info on Rv3826/fadD23 |
| Rv3158/nuoN | (cc=0.3958) | info on Rv3158/nuoN |
| Rv1787/PPE25 | (cc=0.385) | info on Rv1787/PPE25 |
| Rv1770/- | (cc=0.3772) | info on Rv1770/- |
Correlation of Rv1754c/- with Rv3160c/-
Normalized LFCs for Rv1754c/-:
(description and provenance of datasets)
| Rv1754c/- | Rv3160c/- | |
| Fe_supp_jason_reseq | 0.011 | 0.881 |
| low_pH_jason_reseq | -0.442 | -3.092 |
| NO_jason_reseq | 0.055 | -4.489 |
| B6_jason_reseq | -0.284 | -2.051 |
| MHCII_jason_reseq | -0.283 | -1.806 |
| Isoniazid02 | 0.69 | -1.491 |
| Rifampicin4 | 3.344 | 2.708 |
| Ethambutol3 | 0.664 | 3.085 |
| Meropenem3 | -0.374 | 0.308 |
| Vancomycin16 | 1.73 | -0.268 |
| Rv2680_day32 | 0.183 | -2.089 |
| H37Rv_KO_MarP | 0.212 | -1.269 |
| hypoxia_3wks | -0.674 | -3.381 |
| hypoxia_6wks | -0.207 | -3.571 |
| glycerol | 0.164 | -1.712 |
| cholesterol | 0.338 | -0.967 |
| AJ | 0.378 | -1.966 |
| Bibs02 | -0.101 | -2.265 |
| Bibs02c | 0.327 | -1.076 |
| BL6 | 0.366 | -1.144 |
| BL6a | 0.425 | -1.956 |
| BXD01 | 0.856 | -1.613 |
| BXD010 | 0.433 | -1.471 |
| BXD011 | 1.18 | -0.998 |
| BXD03 | 0.443 | -1.81 |
| BXD04 | 0.524 | -0.969 |
| BXD05 | 0.166 | -0.975 |
| BXD06 | 0.286 | -0.752 |
| BXD07 | 0.468 | -1.715 |
| BXD08 | 0.699 | -1.415 |
| BXD09 | 0.134 | -0.939 |
| CAST | -0.362 | -2.107 |
| CCcont | 0.497 | 1.685 |
| DS01 | 0.226 | -1.851 |
| DS02 | 0.145 | -2.911 |
| DS04 | -0.091 | -1.405 |
| DS0c | 0.424 | -1.985 |
| GP01 | 0.408 | -1.322 |
| GP02 | 1.011 | -1.031 |
| GP0c | 0.426 | -1.741 |
| NOD | 0.454 | -0.675 |
| NZO | -0.227 | -2.67 |
| PWK | -1.248 | -2.626 |
| H37Rv_KO_CtpC | 0.654 | -0.76 |
| H37Rv_KO_CtpD | 0.838 | 1.353 |
| H37Rv_KO_Rv1272 | 0.794 | -0.319 |
| H37Rv_KO_SugABC | 0.384 | -0.84 |
| H37Rv_KO_MbtN | 0.113 | 1.424 |
| Trans05 | 1.442 | -1.024 |
| macrophage_unactivated | 0.376 | -0.505 |
| IL1 | 0.439 | -0.113 |
| Rapamycin | 0.157 | 0.227 |
| Tcell | 0.834 | 3.135 |
| GMCSF | 0.187 | -2.445 |
| IFNab | 0.302 | -2.382 |
| IFNg | 0.369 | -1.042 |
| IFNg_GMCSF1 | 0.192 | -1.898 |
| Rv1432_day32 | -0.724 | -2.331 |
| Rv1565c_day32 | -1.987 | -2.443 |
| secA2_input | -0.553 | -0.504 |
| delta_Rv3594 | -0.422 | 0.08 |
| delta_Rv3717 | -0.17 | -0.137 |
| delta_Rv3811 | 0.0 | -0.528 |
| delta_Rv0954 | 0.036 | 0.744 |
| PonA1 | -0.638 | -0.572 |
| EccD1_KO | 0.0 | 1.46 |
| EspI_KO | -0.145 | 1.3 |
| PE35_KO | 0.341 | 0.592 |
| PPE68_KO | 0.179 | 0.787 |
| glycerol2 | 0.196 | 2.413 |
| lignocerate | 0.613 | 0.0 |
| oleate | 0.179 | 0.0 |
| phosphatidylcholine | 0.521 | 0.0 |
| acetate | 0.485 | 0.437 |
| glucAc | 0.372 | 1.481 |
| Rv0950ko | -0.178 | 0.802 |
| Rv1096ko | -0.489 | -1.182 |
| Rv3684ko | -0.043 | -0.662 |
| delta_otsA_trehalose | 1.21 | 3.118 |