Top 10 genes with highest correlation to Rv1754c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2161c/- | (cc=0.4631) | info on Rv2161c/- |
Rv1785c/cyp143 | (cc=0.4129) | info on Rv1785c/cyp143 |
Rv0742/PE_PGRS8 | (cc=0.4082) | info on Rv0742/PE_PGRS8 |
Rv2500c/fadE19 | (cc=0.408) | info on Rv2500c/fadE19 |
Rv1584c/- | (cc=0.4066) | info on Rv1584c/- |
Rv3160c/- | (cc=0.4003) | info on Rv3160c/- |
Rv3826/fadD23 | (cc=0.3982) | info on Rv3826/fadD23 |
Rv3158/nuoN | (cc=0.3958) | info on Rv3158/nuoN |
Rv1787/PPE25 | (cc=0.385) | info on Rv1787/PPE25 |
Rv1770/- | (cc=0.3772) | info on Rv1770/- |
Correlation of Rv1754c/- with Rv0742/PE_PGRS8
Normalized LFCs for Rv1754c/-:
(description and provenance of datasets)
Rv1754c/- | Rv0742/PE_PGRS8 | |
Fe_supp_jason_reseq | 0.011 | -1.888 |
low_pH_jason_reseq | -0.442 | 0.562 |
NO_jason_reseq | 0.055 | -0.538 |
B6_jason_reseq | -0.284 | -1.831 |
MHCII_jason_reseq | -0.283 | -2.072 |
Isoniazid02 | 0.69 | -0.065 |
Rifampicin4 | 3.344 | 1.616 |
Ethambutol3 | 0.664 | -0.044 |
Meropenem3 | -0.374 | 0.386 |
Vancomycin16 | 1.73 | -0.024 |
Rv2680_day32 | 0.183 | 0.605 |
H37Rv_KO_MarP | 0.212 | 0.477 |
hypoxia_3wks | -0.674 | 0.833 |
hypoxia_6wks | -0.207 | -1.088 |
glycerol | 0.164 | 0.045 |
cholesterol | 0.338 | -0.366 |
AJ | 0.378 | 0.128 |
Bibs02 | -0.101 | -0.36 |
Bibs02c | 0.327 | 0.799 |
BL6 | 0.366 | 1.464 |
BL6a | 0.425 | 1.39 |
BXD01 | 0.856 | 1.329 |
BXD010 | 0.433 | 0.519 |
BXD011 | 1.18 | 1.026 |
BXD03 | 0.443 | 1.328 |
BXD04 | 0.524 | 0.0 |
BXD05 | 0.166 | 1.827 |
BXD06 | 0.286 | 0.571 |
BXD07 | 0.468 | 0.83 |
BXD08 | 0.699 | 1.234 |
BXD09 | 0.134 | 1.298 |
CAST | -0.362 | 1.053 |
CCcont | 0.497 | 1.218 |
DS01 | 0.226 | 0.587 |
DS02 | 0.145 | 0.21 |
DS04 | -0.091 | 0.266 |
DS0c | 0.424 | -0.341 |
GP01 | 0.408 | 2.262 |
GP02 | 1.011 | 1.611 |
GP0c | 0.426 | 1.126 |
NOD | 0.454 | -0.6 |
NZO | -0.227 | -0.448 |
PWK | -1.248 | 0.573 |
H37Rv_KO_CtpC | 0.654 | 1.092 |
H37Rv_KO_CtpD | 0.838 | 0.494 |
H37Rv_KO_Rv1272 | 0.794 | 0.94 |
H37Rv_KO_SugABC | 0.384 | 0.915 |
H37Rv_KO_MbtN | 0.113 | 0.937 |
Trans05 | 1.442 | 1.328 |
macrophage_unactivated | 0.376 | 0.922 |
IL1 | 0.439 | 0.581 |
Rapamycin | 0.157 | 0.703 |
Tcell | 0.834 | 0.766 |
GMCSF | 0.187 | 1.328 |
IFNab | 0.302 | 0.287 |
IFNg | 0.369 | -0.561 |
IFNg_GMCSF1 | 0.192 | 0.229 |
Rv1432_day32 | -0.724 | 1.042 |
Rv1565c_day32 | -1.987 | -1.703 |
secA2_input | -0.553 | 1.249 |
delta_Rv3594 | -0.422 | -0.405 |
delta_Rv3717 | -0.17 | -0.447 |
delta_Rv3811 | 0.0 | -0.428 |
delta_Rv0954 | 0.036 | -0.868 |
PonA1 | -0.638 | -2.069 |
EccD1_KO | 0.0 | -0.257 |
EspI_KO | -0.145 | -0.807 |
PE35_KO | 0.341 | -0.166 |
PPE68_KO | 0.179 | 0.0 |
glycerol2 | 0.196 | 0.792 |
lignocerate | 0.613 | 0.737 |
oleate | 0.179 | 1.311 |
phosphatidylcholine | 0.521 | 1.045 |
acetate | 0.485 | 0.359 |
glucAc | 0.372 | 0.254 |
Rv0950ko | -0.178 | -0.205 |
Rv1096ko | -0.489 | -0.54 |
Rv3684ko | -0.043 | -0.793 |
delta_otsA_trehalose | 1.21 | -0.388 |