Top 10 genes with highest correlation to Rv1746/pknF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1291c/- | (cc=0.5267) | info on Rv1291c/- |
| Rv1766/- | (cc=0.5202) | info on Rv1766/- |
| Rv1902c/nanT | (cc=0.4989) | info on Rv1902c/nanT |
| Rv1668c/- | (cc=0.4855) | info on Rv1668c/- |
| Rv2458/mmuM | (cc=0.4844) | info on Rv2458/mmuM |
| Rv2556c/- | (cc=0.4837) | info on Rv2556c/- |
| Rv1638A/- | (cc=0.4805) | info on Rv1638A/- |
| Rv1935c/echA13 | (cc=0.462) | info on Rv1935c/echA13 |
| Rv0838/lpqR | (cc=0.4526) | info on Rv0838/lpqR |
| Rv2949c/- | (cc=0.4462) | info on Rv2949c/- |
Correlation of Rv1746/pknF with Rv2458/mmuM
Normalized LFCs for Rv1746/pknF:
(description and provenance of datasets)
| Rv1746/pknF | Rv2458/mmuM | |
| Fe_supp_jason_reseq | 0.62 | 0.775 |
| low_pH_jason_reseq | 0.612 | -1.405 |
| NO_jason_reseq | 0.391 | -0.137 |
| B6_jason_reseq | 0.103 | 0.127 |
| MHCII_jason_reseq | 0.881 | 1.203 |
| Isoniazid02 | 0.167 | -0.792 |
| Rifampicin4 | -0.252 | -0.875 |
| Ethambutol3 | -0.263 | -0.694 |
| Meropenem3 | 0.071 | 0.244 |
| Vancomycin16 | -0.602 | -0.968 |
| Rv2680_day32 | 0.196 | 0.72 |
| H37Rv_KO_MarP | 0.344 | -0.15 |
| hypoxia_3wks | 0.0 | 0.171 |
| hypoxia_6wks | -0.115 | 0.0 |
| glycerol | -0.547 | 0.0 |
| cholesterol | -0.548 | -0.626 |
| AJ | -0.18 | -0.074 |
| Bibs02 | -0.294 | -0.409 |
| Bibs02c | -0.293 | 0.221 |
| BL6 | -0.42 | -0.884 |
| BL6a | -0.95 | -0.02 |
| BXD01 | -0.188 | -0.746 |
| BXD010 | -0.555 | -0.602 |
| BXD011 | -0.502 | -0.85 |
| BXD03 | -0.229 | -0.719 |
| BXD04 | -0.131 | -0.849 |
| BXD05 | -0.154 | -0.654 |
| BXD06 | -0.306 | -0.908 |
| BXD07 | 0.156 | -0.643 |
| BXD08 | -0.108 | -0.252 |
| BXD09 | -0.315 | -0.447 |
| CAST | -0.506 | -0.14 |
| CCcont | -0.689 | -0.901 |
| DS01 | -0.154 | 0.25 |
| DS02 | -0.466 | 0.153 |
| DS04 | -0.295 | 0.046 |
| DS0c | -0.041 | 0.25 |
| GP01 | -0.235 | 0.735 |
| GP02 | -0.109 | 1.183 |
| GP0c | -0.43 | -0.084 |
| NOD | -0.314 | 0.0 |
| NZO | -0.195 | 0.101 |
| PWK | -0.112 | -0.2 |
| H37Rv_KO_CtpC | -0.928 | -0.141 |
| H37Rv_KO_CtpD | -1.35 | -0.23 |
| H37Rv_KO_Rv1272 | 0.731 | -0.28 |
| H37Rv_KO_SugABC | 0.826 | 0.407 |
| H37Rv_KO_MbtN | -1.247 | -0.635 |
| Trans05 | -0.251 | -0.572 |
| macrophage_unactivated | -0.312 | 0.571 |
| IL1 | -0.51 | 0.409 |
| Rapamycin | -0.304 | 0.126 |
| Tcell | -0.169 | -0.749 |
| GMCSF | 0.85 | 0.943 |
| IFNab | -0.181 | 0.339 |
| IFNg | -0.16 | 1.026 |
| IFNg_GMCSF1 | 0.091 | 0.644 |
| Rv1432_day32 | 0.441 | 0.638 |
| Rv1565c_day32 | -0.284 | 0.1 |
| secA2_input | 0.0 | 0.229 |
| delta_Rv3594 | 0.688 | 0.355 |
| delta_Rv3717 | 0.306 | 0.333 |
| delta_Rv3811 | 0.049 | 0.846 |
| delta_Rv0954 | 0.633 | 0.957 |
| PonA1 | 1.18 | 1.23 |
| EccD1_KO | 1.746 | 0.654 |
| EspI_KO | 0.838 | 0.781 |
| PE35_KO | 0.359 | 0.37 |
| PPE68_KO | 0.394 | 0.208 |
| glycerol2 | -0.688 | 0.336 |
| lignocerate | 0.018 | -0.096 |
| oleate | 0.427 | 0.417 |
| phosphatidylcholine | 0.273 | 0.137 |
| acetate | -0.648 | -0.479 |
| glucAc | -0.374 | -0.921 |
| Rv0950ko | 0.0 | 0.38 |
| Rv1096ko | -0.688 | -0.932 |
| Rv3684ko | -0.684 | -0.098 |
| delta_otsA_trehalose | 1.078 | 0.364 |