Top 10 genes with highest correlation to Rv1691/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0158/- | (cc=0.5079) | info on Rv0158/- |
| Rv0668/rpoC | (cc=0.4748) | info on Rv0668/rpoC |
| Rv1072/- | (cc=0.4724) | info on Rv1072/- |
| Rv2092c/helY | (cc=0.4524) | info on Rv2092c/helY |
| Rv3024c/trmU | (cc=0.4494) | info on Rv3024c/trmU |
| Rv3600c/- | (cc=0.4211) | info on Rv3600c/- |
| Rv0949/uvrD1 | (cc=0.4147) | info on Rv0949/uvrD1 |
| Rv1308/atpA | (cc=0.4082) | info on Rv1308/atpA |
| Rv1575/- | (cc=0.4078) | info on Rv1575/- |
| Rv0879c/- | (cc=0.3991) | info on Rv0879c/- |
Correlation of Rv1691/- with Rv2092c/helY
Normalized LFCs for Rv1691/-:
(description and provenance of datasets)
| Rv1691/- | Rv2092c/helY | |
| Fe_supp_jason_reseq | 2.021 | -0.489 |
| low_pH_jason_reseq | 1.494 | 0.694 |
| NO_jason_reseq | 2.197 | 1.612 |
| B6_jason_reseq | 3.131 | 0.391 |
| MHCII_jason_reseq | 1.251 | 0.112 |
| Isoniazid02 | -0.965 | -0.57 |
| Rifampicin4 | 1.072 | -0.271 |
| Ethambutol3 | 1.626 | 0.798 |
| Meropenem3 | -0.655 | -0.842 |
| Vancomycin16 | 1.051 | -0.528 |
| Rv2680_day32 | 0.168 | -0.387 |
| H37Rv_KO_MarP | 0.789 | -0.367 |
| hypoxia_3wks | -2.006 | -1.232 |
| hypoxia_6wks | -1.311 | -0.507 |
| glycerol | 2.146 | -0.041 |
| cholesterol | 0.7 | -0.037 |
| AJ | -0.304 | 0.034 |
| Bibs02 | -0.666 | 0.098 |
| Bibs02c | 0.124 | -0.243 |
| BL6 | -0.254 | -0.389 |
| BL6a | 0.438 | -0.122 |
| BXD01 | 1.095 | -0.422 |
| BXD010 | 0.928 | 0.044 |
| BXD011 | -0.167 | -0.078 |
| BXD03 | 0.299 | -0.265 |
| BXD04 | 3.773 | 0.649 |
| BXD05 | 0.485 | -0.323 |
| BXD06 | 0.593 | -0.199 |
| BXD07 | 0.558 | -0.215 |
| BXD08 | 2.006 | 0.108 |
| BXD09 | 0.238 | -0.373 |
| CAST | 1.935 | 1.188 |
| CCcont | 0.538 | -0.873 |
| DS01 | -0.149 | -0.299 |
| DS02 | 0.129 | -0.123 |
| DS04 | -0.394 | -0.202 |
| DS0c | -0.79 | -0.426 |
| GP01 | 0.266 | 0.019 |
| GP02 | 1.336 | 0.805 |
| GP0c | 1.093 | -0.059 |
| NOD | -0.818 | 0.391 |
| NZO | 0.538 | 0.172 |
| PWK | 0.871 | 0.669 |
| H37Rv_KO_CtpC | 1.365 | 0.22 |
| H37Rv_KO_CtpD | -0.08 | -0.058 |
| H37Rv_KO_Rv1272 | 0.163 | 0.292 |
| H37Rv_KO_SugABC | -0.278 | 0.019 |
| H37Rv_KO_MbtN | 0.921 | -0.075 |
| Trans05 | -0.171 | 0.686 |
| macrophage_unactivated | -0.275 | -0.574 |
| IL1 | -1.148 | -0.092 |
| Rapamycin | -0.267 | -0.424 |
| Tcell | 1.619 | -0.179 |
| GMCSF | -1.328 | -0.319 |
| IFNab | -0.547 | -0.048 |
| IFNg | -1.034 | 0.061 |
| IFNg_GMCSF1 | -1.216 | -0.025 |
| Rv1432_day32 | 0.155 | -0.103 |
| Rv1565c_day32 | -0.182 | 0.073 |
| secA2_input | 1.052 | 0.493 |
| delta_Rv3594 | -0.291 | -0.489 |
| delta_Rv3717 | 1.679 | -0.287 |
| delta_Rv3811 | 0.654 | -0.43 |
| delta_Rv0954 | -2.95 | -0.691 |
| PonA1 | -0.143 | -0.762 |
| EccD1_KO | 1.312 | 0.526 |
| EspI_KO | 0.841 | 0.607 |
| PE35_KO | 1.444 | 0.05 |
| PPE68_KO | 0.771 | 0.339 |
| glycerol2 | 0.202 | 0.055 |
| lignocerate | 0.175 | 0.138 |
| oleate | -0.352 | -0.155 |
| phosphatidylcholine | 0.104 | 0.626 |
| acetate | 0.56 | 0.527 |
| glucAc | 0.0 | -0.457 |
| Rv0950ko | -0.335 | -0.051 |
| Rv1096ko | 3.251 | -0.256 |
| Rv3684ko | 1.615 | 0.082 |
| delta_otsA_trehalose | -1.218 | 0.205 |