Top 10 genes with highest correlation to Rv1691/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0158/- | (cc=0.5079) | info on Rv0158/- |
| Rv0668/rpoC | (cc=0.4748) | info on Rv0668/rpoC |
| Rv1072/- | (cc=0.4724) | info on Rv1072/- |
| Rv2092c/helY | (cc=0.4524) | info on Rv2092c/helY |
| Rv3024c/trmU | (cc=0.4494) | info on Rv3024c/trmU |
| Rv3600c/- | (cc=0.4211) | info on Rv3600c/- |
| Rv0949/uvrD1 | (cc=0.4147) | info on Rv0949/uvrD1 |
| Rv1308/atpA | (cc=0.4082) | info on Rv1308/atpA |
| Rv1575/- | (cc=0.4078) | info on Rv1575/- |
| Rv0879c/- | (cc=0.3991) | info on Rv0879c/- |
Correlation of Rv1691/- with Rv0879c/-
Normalized LFCs for Rv1691/-:
(description and provenance of datasets)
| Rv1691/- | Rv0879c/- | |
| Fe_supp_jason_reseq | 2.021 | -0.39 |
| low_pH_jason_reseq | 1.494 | 3.554 |
| NO_jason_reseq | 2.197 | 3.085 |
| B6_jason_reseq | 3.131 | 2.785 |
| MHCII_jason_reseq | 1.251 | -0.487 |
| Isoniazid02 | -0.965 | 2.165 |
| Rifampicin4 | 1.072 | -1.313 |
| Ethambutol3 | 1.626 | 0.593 |
| Meropenem3 | -0.655 | -0.292 |
| Vancomycin16 | 1.051 | -1.151 |
| Rv2680_day32 | 0.168 | 0.0 |
| H37Rv_KO_MarP | 0.789 | 0.106 |
| hypoxia_3wks | -2.006 | -4.37 |
| hypoxia_6wks | -1.311 | 1.188 |
| glycerol | 2.146 | -0.906 |
| cholesterol | 0.7 | -0.762 |
| AJ | -0.304 | -2.397 |
| Bibs02 | -0.666 | -2.787 |
| Bibs02c | 0.124 | 0.0 |
| BL6 | -0.254 | -1.907 |
| BL6a | 0.438 | 2.642 |
| BXD01 | 1.095 | 2.363 |
| BXD010 | 0.928 | 0.329 |
| BXD011 | -0.167 | 3.301 |
| BXD03 | 0.299 | 0.268 |
| BXD04 | 3.773 | 0.611 |
| BXD05 | 0.485 | 2.006 |
| BXD06 | 0.593 | 1.543 |
| BXD07 | 0.558 | 2.576 |
| BXD08 | 2.006 | 0.0 |
| BXD09 | 0.238 | 1.495 |
| CAST | 1.935 | -0.566 |
| CCcont | 0.538 | -1.867 |
| DS01 | -0.149 | -0.972 |
| DS02 | 0.129 | -1.979 |
| DS04 | -0.394 | -2.764 |
| DS0c | -0.79 | -1.851 |
| GP01 | 0.266 | -1.407 |
| GP02 | 1.336 | -0.807 |
| GP0c | 1.093 | 1.482 |
| NOD | -0.818 | -2.32 |
| NZO | 0.538 | -0.204 |
| PWK | 0.871 | -0.953 |
| H37Rv_KO_CtpC | 1.365 | 0.753 |
| H37Rv_KO_CtpD | -0.08 | 3.509 |
| H37Rv_KO_Rv1272 | 0.163 | -1.128 |
| H37Rv_KO_SugABC | -0.278 | -1.51 |
| H37Rv_KO_MbtN | 0.921 | 3.036 |
| Trans05 | -0.171 | 0.385 |
| macrophage_unactivated | -0.275 | -1.916 |
| IL1 | -1.148 | -1.296 |
| Rapamycin | -0.267 | -2.75 |
| Tcell | 1.619 | -0.143 |
| GMCSF | -1.328 | -3.992 |
| IFNab | -0.547 | -2.473 |
| IFNg | -1.034 | 0.756 |
| IFNg_GMCSF1 | -1.216 | -1.106 |
| Rv1432_day32 | 0.155 | 0.0 |
| Rv1565c_day32 | -0.182 | 0.559 |
| secA2_input | 1.052 | 3.788 |
| delta_Rv3594 | -0.291 | 0.512 |
| delta_Rv3717 | 1.679 | 1.86 |
| delta_Rv3811 | 0.654 | 0.876 |
| delta_Rv0954 | -2.95 | -1.93 |
| PonA1 | -0.143 | 0.771 |
| EccD1_KO | 1.312 | -1.365 |
| EspI_KO | 0.841 | 0.0 |
| PE35_KO | 1.444 | -0.922 |
| PPE68_KO | 0.771 | 1.286 |
| glycerol2 | 0.202 | -2.375 |
| lignocerate | 0.175 | -2.241 |
| oleate | -0.352 | -3.726 |
| phosphatidylcholine | 0.104 | -2.801 |
| acetate | 0.56 | -3.469 |
| glucAc | 0.0 | -1.902 |
| Rv0950ko | -0.335 | 0.567 |
| Rv1096ko | 3.251 | 2.18 |
| Rv3684ko | 1.615 | -1.546 |
| delta_otsA_trehalose | -1.218 | -0.035 |