Top 10 genes with highest correlation to Rv1691/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0158/- | (cc=0.5079) | info on Rv0158/- |
| Rv0668/rpoC | (cc=0.4748) | info on Rv0668/rpoC |
| Rv1072/- | (cc=0.4724) | info on Rv1072/- |
| Rv2092c/helY | (cc=0.4524) | info on Rv2092c/helY |
| Rv3024c/trmU | (cc=0.4494) | info on Rv3024c/trmU |
| Rv3600c/- | (cc=0.4211) | info on Rv3600c/- |
| Rv0949/uvrD1 | (cc=0.4147) | info on Rv0949/uvrD1 |
| Rv1308/atpA | (cc=0.4082) | info on Rv1308/atpA |
| Rv1575/- | (cc=0.4078) | info on Rv1575/- |
| Rv0879c/- | (cc=0.3991) | info on Rv0879c/- |
Correlation of Rv1691/- with Rv0949/uvrD1
Normalized LFCs for Rv1691/-:
(description and provenance of datasets)
| Rv1691/- | Rv0949/uvrD1 | |
| Fe_supp_jason_reseq | 2.021 | 0.974 |
| low_pH_jason_reseq | 1.494 | 0.303 |
| NO_jason_reseq | 2.197 | -0.845 |
| B6_jason_reseq | 3.131 | 0.0 |
| MHCII_jason_reseq | 1.251 | 0.257 |
| Isoniazid02 | -0.965 | 0.0 |
| Rifampicin4 | 1.072 | -0.173 |
| Ethambutol3 | 1.626 | 0.786 |
| Meropenem3 | -0.655 | 0.34 |
| Vancomycin16 | 1.051 | -0.939 |
| Rv2680_day32 | 0.168 | 0.0 |
| H37Rv_KO_MarP | 0.789 | -0.586 |
| hypoxia_3wks | -2.006 | -0.722 |
| hypoxia_6wks | -1.311 | -0.808 |
| glycerol | 2.146 | 1.121 |
| cholesterol | 0.7 | 0.89 |
| AJ | -0.304 | 0.232 |
| Bibs02 | -0.666 | 0.183 |
| Bibs02c | 0.124 | 0.209 |
| BL6 | -0.254 | 0.97 |
| BL6a | 0.438 | 0.696 |
| BXD01 | 1.095 | 1.781 |
| BXD010 | 0.928 | 1.115 |
| BXD011 | -0.167 | 0.782 |
| BXD03 | 0.299 | 1.177 |
| BXD04 | 3.773 | 2.027 |
| BXD05 | 0.485 | 1.231 |
| BXD06 | 0.593 | 1.436 |
| BXD07 | 0.558 | 1.49 |
| BXD08 | 2.006 | 1.381 |
| BXD09 | 0.238 | 1.018 |
| CAST | 1.935 | 0.23 |
| CCcont | 0.538 | 1.3 |
| DS01 | -0.149 | 0.0 |
| DS02 | 0.129 | 0.0 |
| DS04 | -0.394 | 1.077 |
| DS0c | -0.79 | 0.0 |
| GP01 | 0.266 | 1.099 |
| GP02 | 1.336 | 1.434 |
| GP0c | 1.093 | 2.292 |
| NOD | -0.818 | 0.225 |
| NZO | 0.538 | 0.0 |
| PWK | 0.871 | 0.831 |
| H37Rv_KO_CtpC | 1.365 | 0.309 |
| H37Rv_KO_CtpD | -0.08 | 0.241 |
| H37Rv_KO_Rv1272 | 0.163 | 1.517 |
| H37Rv_KO_SugABC | -0.278 | 0.608 |
| H37Rv_KO_MbtN | 0.921 | 0.506 |
| Trans05 | -0.171 | 0.642 |
| macrophage_unactivated | -0.275 | 0.0 |
| IL1 | -1.148 | -0.276 |
| Rapamycin | -0.267 | 0.522 |
| Tcell | 1.619 | 0.554 |
| GMCSF | -1.328 | 0.23 |
| IFNab | -0.547 | 0.0 |
| IFNg | -1.034 | 0.233 |
| IFNg_GMCSF1 | -1.216 | -0.606 |
| Rv1432_day32 | 0.155 | -0.632 |
| Rv1565c_day32 | -0.182 | 0.0 |
| secA2_input | 1.052 | 0.302 |
| delta_Rv3594 | -0.291 | 1.205 |
| delta_Rv3717 | 1.679 | 1.881 |
| delta_Rv3811 | 0.654 | 1.172 |
| delta_Rv0954 | -2.95 | -1.292 |
| PonA1 | -0.143 | -0.53 |
| EccD1_KO | 1.312 | 0.526 |
| EspI_KO | 0.841 | -0.799 |
| PE35_KO | 1.444 | 0.467 |
| PPE68_KO | 0.771 | 0.512 |
| glycerol2 | 0.202 | -1.562 |
| lignocerate | 0.175 | -1.358 |
| oleate | -0.352 | -0.537 |
| phosphatidylcholine | 0.104 | -1.562 |
| acetate | 0.56 | 0.342 |
| glucAc | 0.0 | -0.249 |
| Rv0950ko | -0.335 | -1.553 |
| Rv1096ko | 3.251 | 0.546 |
| Rv3684ko | 1.615 | 1.477 |
| delta_otsA_trehalose | -1.218 | -0.199 |