Top 10 genes with highest correlation to Rv1691/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0158/- | (cc=0.5079) | info on Rv0158/- |
| Rv0668/rpoC | (cc=0.4748) | info on Rv0668/rpoC |
| Rv1072/- | (cc=0.4724) | info on Rv1072/- |
| Rv2092c/helY | (cc=0.4524) | info on Rv2092c/helY |
| Rv3024c/trmU | (cc=0.4494) | info on Rv3024c/trmU |
| Rv3600c/- | (cc=0.4211) | info on Rv3600c/- |
| Rv0949/uvrD1 | (cc=0.4147) | info on Rv0949/uvrD1 |
| Rv1308/atpA | (cc=0.4082) | info on Rv1308/atpA |
| Rv1575/- | (cc=0.4078) | info on Rv1575/- |
| Rv0879c/- | (cc=0.3991) | info on Rv0879c/- |
Correlation of Rv1691/- with Rv0668/rpoC
Normalized LFCs for Rv1691/-:
(description and provenance of datasets)
| Rv1691/- | Rv0668/rpoC | |
| Fe_supp_jason_reseq | 2.021 | 0.319 |
| low_pH_jason_reseq | 1.494 | 2.259 |
| NO_jason_reseq | 2.197 | 2.809 |
| B6_jason_reseq | 3.131 | 1.836 |
| MHCII_jason_reseq | 1.251 | -0.149 |
| Isoniazid02 | -0.965 | -0.108 |
| Rifampicin4 | 1.072 | 1.172 |
| Ethambutol3 | 1.626 | -0.626 |
| Meropenem3 | -0.655 | -0.182 |
| Vancomycin16 | 1.051 | -0.196 |
| Rv2680_day32 | 0.168 | 0.0 |
| H37Rv_KO_MarP | 0.789 | 0.203 |
| hypoxia_3wks | -2.006 | -1.934 |
| hypoxia_6wks | -1.311 | 1.293 |
| glycerol | 2.146 | 0.12 |
| cholesterol | 0.7 | 0.0 |
| AJ | -0.304 | 0.934 |
| Bibs02 | -0.666 | -0.371 |
| Bibs02c | 0.124 | 0.124 |
| BL6 | -0.254 | 1.017 |
| BL6a | 0.438 | 1.175 |
| BXD01 | 1.095 | 2.02 |
| BXD010 | 0.928 | 1.496 |
| BXD011 | -0.167 | 2.698 |
| BXD03 | 0.299 | 1.173 |
| BXD04 | 3.773 | 2.865 |
| BXD05 | 0.485 | 2.213 |
| BXD06 | 0.593 | 1.994 |
| BXD07 | 0.558 | 1.825 |
| BXD08 | 2.006 | 2.118 |
| BXD09 | 0.238 | 0.974 |
| CAST | 1.935 | 1.023 |
| CCcont | 0.538 | 0.663 |
| DS01 | -0.149 | 0.522 |
| DS02 | 0.129 | 0.129 |
| DS04 | -0.394 | 0.523 |
| DS0c | -0.79 | -0.137 |
| GP01 | 0.266 | -0.277 |
| GP02 | 1.336 | -0.303 |
| GP0c | 1.093 | 0.577 |
| NOD | -0.818 | -0.142 |
| NZO | 0.538 | 0.886 |
| PWK | 0.871 | 1.537 |
| H37Rv_KO_CtpC | 1.365 | -0.455 |
| H37Rv_KO_CtpD | -0.08 | 0.51 |
| H37Rv_KO_Rv1272 | 0.163 | 0.239 |
| H37Rv_KO_SugABC | -0.278 | 1.074 |
| H37Rv_KO_MbtN | 0.921 | 1.0 |
| Trans05 | -0.171 | 1.024 |
| macrophage_unactivated | -0.275 | -0.581 |
| IL1 | -1.148 | -1.406 |
| Rapamycin | -0.267 | -0.368 |
| Tcell | 1.619 | 0.362 |
| GMCSF | -1.328 | -1.046 |
| IFNab | -0.547 | -0.363 |
| IFNg | -1.034 | -0.673 |
| IFNg_GMCSF1 | -1.216 | -1.012 |
| Rv1432_day32 | 0.155 | 0.139 |
| Rv1565c_day32 | -0.182 | -0.588 |
| secA2_input | 1.052 | 0.445 |
| delta_Rv3594 | -0.291 | -0.061 |
| delta_Rv3717 | 1.679 | 1.233 |
| delta_Rv3811 | 0.654 | 0.559 |
| delta_Rv0954 | -2.95 | -1.562 |
| PonA1 | -0.143 | -1.2 |
| EccD1_KO | 1.312 | 0.0 |
| EspI_KO | 0.841 | 0.211 |
| PE35_KO | 1.444 | 0.42 |
| PPE68_KO | 0.771 | -0.512 |
| glycerol2 | 0.202 | -1.073 |
| lignocerate | 0.175 | -0.22 |
| oleate | -0.352 | -1.086 |
| phosphatidylcholine | 0.104 | 0.224 |
| acetate | 0.56 | 0.507 |
| glucAc | 0.0 | 0.279 |
| Rv0950ko | -0.335 | 0.0 |
| Rv1096ko | 3.251 | -0.832 |
| Rv3684ko | 1.615 | -1.159 |
| delta_otsA_trehalose | -1.218 | -0.773 |