Top 10 genes with highest correlation to Rv1690/lprJ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1274/lprB | (cc=0.4838) | info on Rv1274/lprB |
| Rv3286c/sigF | (cc=0.4691) | info on Rv3286c/sigF |
| Rv1473/- | (cc=0.4679) | info on Rv1473/- |
| Rv3202c/- | (cc=0.4677) | info on Rv3202c/- |
| Rv2467/pepN | (cc=0.4535) | info on Rv2467/pepN |
| Rv3160c/- | (cc=0.4409) | info on Rv3160c/- |
| Rv3032/- | (cc=0.4333) | info on Rv3032/- |
| Rv1347c/mbtK | (cc=0.4256) | info on Rv1347c/mbtK |
| Rv2199c/- | (cc=0.4239) | info on Rv2199c/- |
| Rv0574c/- | (cc=0.4135) | info on Rv0574c/- |
Correlation of Rv1690/lprJ with Rv3160c/-
Normalized LFCs for Rv1690/lprJ:
(description and provenance of datasets)
| Rv1690/lprJ | Rv3160c/- | |
| Fe_supp_jason_reseq | -0.508 | 0.881 |
| low_pH_jason_reseq | 0.925 | -3.092 |
| NO_jason_reseq | -0.953 | -4.489 |
| B6_jason_reseq | -0.403 | -2.051 |
| MHCII_jason_reseq | 0.452 | -1.806 |
| Isoniazid02 | -1.132 | -1.491 |
| Rifampicin4 | 1.042 | 2.708 |
| Ethambutol3 | -1.121 | 3.085 |
| Meropenem3 | -0.151 | 0.308 |
| Vancomycin16 | -0.451 | -0.268 |
| Rv2680_day32 | -0.476 | -2.089 |
| H37Rv_KO_MarP | -0.717 | -1.269 |
| hypoxia_3wks | -0.275 | -3.381 |
| hypoxia_6wks | -2.088 | -3.571 |
| glycerol | 0.663 | -1.712 |
| cholesterol | 0.726 | -0.967 |
| AJ | -1.177 | -1.966 |
| Bibs02 | -1.827 | -2.265 |
| Bibs02c | 1.303 | -1.076 |
| BL6 | -0.195 | -1.144 |
| BL6a | 0.871 | -1.956 |
| BXD01 | -0.132 | -1.613 |
| BXD010 | 0.776 | -1.471 |
| BXD011 | -0.581 | -0.998 |
| BXD03 | -1.408 | -1.81 |
| BXD04 | -0.504 | -0.969 |
| BXD05 | -1.886 | -0.975 |
| BXD06 | -0.643 | -0.752 |
| BXD07 | -0.598 | -1.715 |
| BXD08 | 0.143 | -1.415 |
| BXD09 | -0.713 | -0.939 |
| CAST | -1.942 | -2.107 |
| CCcont | 0.559 | 1.685 |
| DS01 | 0.075 | -1.851 |
| DS02 | -0.786 | -2.911 |
| DS04 | -1.781 | -1.405 |
| DS0c | -1.045 | -1.985 |
| GP01 | 0.031 | -1.322 |
| GP02 | 0.881 | -1.031 |
| GP0c | 0.365 | -1.741 |
| NOD | 0.072 | -0.675 |
| NZO | 0.535 | -2.67 |
| PWK | -1.878 | -2.626 |
| H37Rv_KO_CtpC | -0.314 | -0.76 |
| H37Rv_KO_CtpD | 0.53 | 1.353 |
| H37Rv_KO_Rv1272 | -0.831 | -0.319 |
| H37Rv_KO_SugABC | 0.371 | -0.84 |
| H37Rv_KO_MbtN | 0.362 | 1.424 |
| Trans05 | -1.832 | -1.024 |
| macrophage_unactivated | 0.735 | -0.505 |
| IL1 | -1.092 | -0.113 |
| Rapamycin | -1.129 | 0.227 |
| Tcell | 1.14 | 3.135 |
| GMCSF | -1.497 | -2.445 |
| IFNab | -2.05 | -2.382 |
| IFNg | -1.376 | -1.042 |
| IFNg_GMCSF1 | 0.327 | -1.898 |
| Rv1432_day32 | -0.056 | -2.331 |
| Rv1565c_day32 | 1.714 | -2.443 |
| secA2_input | 0.513 | -0.504 |
| delta_Rv3594 | 0.346 | 0.08 |
| delta_Rv3717 | -0.195 | -0.137 |
| delta_Rv3811 | 0.457 | -0.528 |
| delta_Rv0954 | 0.123 | 0.744 |
| PonA1 | 0.666 | -0.572 |
| EccD1_KO | 0.428 | 1.46 |
| EspI_KO | 1.991 | 1.3 |
| PE35_KO | 0.986 | 0.592 |
| PPE68_KO | 1.664 | 0.787 |
| glycerol2 | 0.797 | 2.413 |
| lignocerate | 0.413 | 0.0 |
| oleate | 0.108 | 0.0 |
| phosphatidylcholine | 0.353 | 0.0 |
| acetate | 0.096 | 0.437 |
| glucAc | -0.149 | 1.481 |
| Rv0950ko | 1.086 | 0.802 |
| Rv1096ko | 1.616 | -1.182 |
| Rv3684ko | 0.927 | -0.662 |
| delta_otsA_trehalose | 3.883 | 3.118 |