Top 10 genes with highest correlation to Rv1690/lprJ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1274/lprB | (cc=0.4838) | info on Rv1274/lprB |
| Rv3286c/sigF | (cc=0.4691) | info on Rv3286c/sigF |
| Rv1473/- | (cc=0.4679) | info on Rv1473/- |
| Rv3202c/- | (cc=0.4677) | info on Rv3202c/- |
| Rv2467/pepN | (cc=0.4535) | info on Rv2467/pepN |
| Rv3160c/- | (cc=0.4409) | info on Rv3160c/- |
| Rv3032/- | (cc=0.4333) | info on Rv3032/- |
| Rv1347c/mbtK | (cc=0.4256) | info on Rv1347c/mbtK |
| Rv2199c/- | (cc=0.4239) | info on Rv2199c/- |
| Rv0574c/- | (cc=0.4135) | info on Rv0574c/- |
Correlation of Rv1690/lprJ with Rv1473/-
Normalized LFCs for Rv1690/lprJ:
(description and provenance of datasets)
| Rv1690/lprJ | Rv1473/- | |
| Fe_supp_jason_reseq | -0.508 | 1.664 |
| low_pH_jason_reseq | 0.925 | 0.179 |
| NO_jason_reseq | -0.953 | 0.281 |
| B6_jason_reseq | -0.403 | -0.421 |
| MHCII_jason_reseq | 0.452 | 1.03 |
| Isoniazid02 | -1.132 | -0.141 |
| Rifampicin4 | 1.042 | 0.141 |
| Ethambutol3 | -1.121 | 0.353 |
| Meropenem3 | -0.151 | 0.545 |
| Vancomycin16 | -0.451 | 0.403 |
| Rv2680_day32 | -0.476 | 1.437 |
| H37Rv_KO_MarP | -0.717 | -0.313 |
| hypoxia_3wks | -0.275 | -1.132 |
| hypoxia_6wks | -2.088 | -2.088 |
| glycerol | 0.663 | 2.61 |
| cholesterol | 0.726 | 0.871 |
| AJ | -1.177 | -1.55 |
| Bibs02 | -1.827 | -0.167 |
| Bibs02c | 1.303 | 0.674 |
| BL6 | -0.195 | -1.06 |
| BL6a | 0.871 | 0.057 |
| BXD01 | -0.132 | -1.386 |
| BXD010 | 0.776 | -1.363 |
| BXD011 | -0.581 | -1.165 |
| BXD03 | -1.408 | -1.553 |
| BXD04 | -0.504 | -1.316 |
| BXD05 | -1.886 | -1.055 |
| BXD06 | -0.643 | -1.221 |
| BXD07 | -0.598 | -1.174 |
| BXD08 | 0.143 | -1.527 |
| BXD09 | -0.713 | -1.286 |
| CAST | -1.942 | -1.952 |
| CCcont | 0.559 | 1.227 |
| DS01 | 0.075 | -0.14 |
| DS02 | -0.786 | -1.226 |
| DS04 | -1.781 | -1.192 |
| DS0c | -1.045 | -0.064 |
| GP01 | 0.031 | 0.811 |
| GP02 | 0.881 | -0.603 |
| GP0c | 0.365 | -0.391 |
| NOD | 0.072 | -1.38 |
| NZO | 0.535 | -1.825 |
| PWK | -1.878 | -2.087 |
| H37Rv_KO_CtpC | -0.314 | -0.835 |
| H37Rv_KO_CtpD | 0.53 | 0.173 |
| H37Rv_KO_Rv1272 | -0.831 | -0.942 |
| H37Rv_KO_SugABC | 0.371 | 1.128 |
| H37Rv_KO_MbtN | 0.362 | 0.086 |
| Trans05 | -1.832 | -0.803 |
| macrophage_unactivated | 0.735 | 0.802 |
| IL1 | -1.092 | -1.344 |
| Rapamycin | -1.129 | -0.175 |
| Tcell | 1.14 | -1.004 |
| GMCSF | -1.497 | -0.15 |
| IFNab | -2.05 | -0.348 |
| IFNg | -1.376 | -1.638 |
| IFNg_GMCSF1 | 0.327 | -0.757 |
| Rv1432_day32 | -0.056 | 0.992 |
| Rv1565c_day32 | 1.714 | 1.515 |
| secA2_input | 0.513 | 1.623 |
| delta_Rv3594 | 0.346 | 2.688 |
| delta_Rv3717 | -0.195 | 0.82 |
| delta_Rv3811 | 0.457 | 2.104 |
| delta_Rv0954 | 0.123 | 1.005 |
| PonA1 | 0.666 | 1.445 |
| EccD1_KO | 0.428 | 0.539 |
| EspI_KO | 1.991 | 1.474 |
| PE35_KO | 0.986 | 1.193 |
| PPE68_KO | 1.664 | 1.6 |
| glycerol2 | 0.797 | -0.615 |
| lignocerate | 0.413 | -0.785 |
| oleate | 0.108 | -1.195 |
| phosphatidylcholine | 0.353 | -0.803 |
| acetate | 0.096 | 0.527 |
| glucAc | -0.149 | 0.707 |
| Rv0950ko | 1.086 | -0.932 |
| Rv1096ko | 1.616 | -1.559 |
| Rv3684ko | 0.927 | -1.228 |
| delta_otsA_trehalose | 3.883 | 1.844 |