Top 10 genes with highest correlation to Rv1690/lprJ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1274/lprB | (cc=0.4838) | info on Rv1274/lprB |
| Rv3286c/sigF | (cc=0.4691) | info on Rv3286c/sigF |
| Rv1473/- | (cc=0.4679) | info on Rv1473/- |
| Rv3202c/- | (cc=0.4677) | info on Rv3202c/- |
| Rv2467/pepN | (cc=0.4535) | info on Rv2467/pepN |
| Rv3160c/- | (cc=0.4409) | info on Rv3160c/- |
| Rv3032/- | (cc=0.4333) | info on Rv3032/- |
| Rv1347c/mbtK | (cc=0.4256) | info on Rv1347c/mbtK |
| Rv2199c/- | (cc=0.4239) | info on Rv2199c/- |
| Rv0574c/- | (cc=0.4135) | info on Rv0574c/- |
Correlation of Rv1690/lprJ with Rv1274/lprB
Normalized LFCs for Rv1690/lprJ:
(description and provenance of datasets)
| Rv1690/lprJ | Rv1274/lprB | |
| Fe_supp_jason_reseq | -0.508 | 1.339 |
| low_pH_jason_reseq | 0.925 | 0.0 |
| NO_jason_reseq | -0.953 | 0.362 |
| B6_jason_reseq | -0.403 | 0.0 |
| MHCII_jason_reseq | 0.452 | 1.234 |
| Isoniazid02 | -1.132 | -0.534 |
| Rifampicin4 | 1.042 | -2.328 |
| Ethambutol3 | -1.121 | 0.496 |
| Meropenem3 | -0.151 | 1.126 |
| Vancomycin16 | -0.451 | -1.632 |
| Rv2680_day32 | -0.476 | 0.249 |
| H37Rv_KO_MarP | -0.717 | 1.782 |
| hypoxia_3wks | -0.275 | 0.443 |
| hypoxia_6wks | -2.088 | -1.969 |
| glycerol | 0.663 | -2.411 |
| cholesterol | 0.726 | -2.343 |
| AJ | -1.177 | -1.171 |
| Bibs02 | -1.827 | -2.958 |
| Bibs02c | 1.303 | -0.523 |
| BL6 | -0.195 | -2.023 |
| BL6a | 0.871 | -3.204 |
| BXD01 | -0.132 | -1.555 |
| BXD010 | 0.776 | -2.072 |
| BXD011 | -0.581 | -1.711 |
| BXD03 | -1.408 | -2.187 |
| BXD04 | -0.504 | -1.877 |
| BXD05 | -1.886 | -1.921 |
| BXD06 | -0.643 | -2.159 |
| BXD07 | -0.598 | -2.24 |
| BXD08 | 0.143 | -2.151 |
| BXD09 | -0.713 | -2.133 |
| CAST | -1.942 | -3.495 |
| CCcont | 0.559 | -1.682 |
| DS01 | 0.075 | -2.82 |
| DS02 | -0.786 | -3.104 |
| DS04 | -1.781 | -2.769 |
| DS0c | -1.045 | -3.095 |
| GP01 | 0.031 | -1.597 |
| GP02 | 0.881 | -0.42 |
| GP0c | 0.365 | -1.645 |
| NOD | 0.072 | -3.409 |
| NZO | 0.535 | -0.556 |
| PWK | -1.878 | -2.977 |
| H37Rv_KO_CtpC | -0.314 | 0.652 |
| H37Rv_KO_CtpD | 0.53 | -2.049 |
| H37Rv_KO_Rv1272 | -0.831 | -2.281 |
| H37Rv_KO_SugABC | 0.371 | -1.053 |
| H37Rv_KO_MbtN | 0.362 | -1.161 |
| Trans05 | -1.832 | -1.865 |
| macrophage_unactivated | 0.735 | -1.31 |
| IL1 | -1.092 | -2.011 |
| Rapamycin | -1.129 | -2.081 |
| Tcell | 1.14 | -0.629 |
| GMCSF | -1.497 | -1.79 |
| IFNab | -2.05 | -2.05 |
| IFNg | -1.376 | -1.812 |
| IFNg_GMCSF1 | 0.327 | -1.7 |
| Rv1432_day32 | -0.056 | 0.0 |
| Rv1565c_day32 | 1.714 | -0.894 |
| secA2_input | 0.513 | -0.291 |
| delta_Rv3594 | 0.346 | -0.402 |
| delta_Rv3717 | -0.195 | -0.979 |
| delta_Rv3811 | 0.457 | -1.056 |
| delta_Rv0954 | 0.123 | -1.292 |
| PonA1 | 0.666 | -0.979 |
| EccD1_KO | 0.428 | 3.164 |
| EspI_KO | 1.991 | 2.396 |
| PE35_KO | 0.986 | 2.689 |
| PPE68_KO | 1.664 | 3.66 |
| glycerol2 | 0.797 | -1.016 |
| lignocerate | 0.413 | -1.835 |
| oleate | 0.108 | -2.912 |
| phosphatidylcholine | 0.353 | -0.31 |
| acetate | 0.096 | -0.951 |
| glucAc | -0.149 | -4.153 |
| Rv0950ko | 1.086 | 2.877 |
| Rv1096ko | 1.616 | 3.278 |
| Rv3684ko | 0.927 | 4.087 |
| delta_otsA_trehalose | 3.883 | 2.212 |