Top 10 genes with highest correlation to Rv1677/dsbF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0506/mmpS2 | (cc=0.4474) | info on Rv0506/mmpS2 |
| Rv1068c/PE_PGRS20 | (cc=0.4223) | info on Rv1068c/PE_PGRS20 |
| Rv1899c/lppD | (cc=0.4029) | info on Rv1899c/lppD |
| Rv1427c/fadD12 | (cc=0.3955) | info on Rv1427c/fadD12 |
| Rv2004c/- | (cc=0.3943) | info on Rv2004c/- |
| Rv1670/- | (cc=0.3927) | info on Rv1670/- |
| Rv1916/aceAb | (cc=0.3886) | info on Rv1916/aceAb |
| Rv0064A/vapB1 | (cc=0.3791) | info on Rv0064A/vapB1 |
| Rv2436/rbsK | (cc=0.3763) | info on Rv2436/rbsK |
| Rv2549c/vapC20 | (cc=0.3737) | info on Rv2549c/vapC20 |
Correlation of Rv1677/dsbF with Rv2436/rbsK
Normalized LFCs for Rv1677/dsbF:
(description and provenance of datasets)
| Rv1677/dsbF | Rv2436/rbsK | |
| Fe_supp_jason_reseq | 0.188 | 0.458 |
| low_pH_jason_reseq | 0.381 | 0.636 |
| NO_jason_reseq | 0.0 | 0.344 |
| B6_jason_reseq | -0.743 | -0.727 |
| MHCII_jason_reseq | -0.655 | -1.484 |
| Isoniazid02 | -1.352 | -0.838 |
| Rifampicin4 | 0.303 | 0.72 |
| Ethambutol3 | -1.345 | -1.026 |
| Meropenem3 | -1.701 | -0.564 |
| Vancomycin16 | -0.239 | -0.745 |
| Rv2680_day32 | 3.254 | 1.263 |
| H37Rv_KO_MarP | 0.313 | 0.095 |
| hypoxia_3wks | 1.344 | 0.0 |
| hypoxia_6wks | 0.301 | -1.723 |
| glycerol | 0.471 | -0.394 |
| cholesterol | 1.022 | 0.897 |
| AJ | -0.274 | 0.425 |
| Bibs02 | -0.294 | 0.868 |
| Bibs02c | -0.079 | 1.716 |
| BL6 | -0.906 | -0.179 |
| BL6a | -1.291 | 0.672 |
| BXD01 | -0.944 | 0.523 |
| BXD010 | -1.134 | -0.15 |
| BXD011 | 0.824 | 0.028 |
| BXD03 | -0.79 | 0.321 |
| BXD04 | -0.434 | -0.028 |
| BXD05 | 0.0 | 0.247 |
| BXD06 | -0.87 | 0.193 |
| BXD07 | 0.323 | 0.823 |
| BXD08 | 0.35 | 0.756 |
| BXD09 | 0.102 | -0.71 |
| CAST | -0.809 | -0.105 |
| CCcont | -1.198 | 1.24 |
| DS01 | -0.089 | 0.296 |
| DS02 | 1.843 | 0.807 |
| DS04 | 0.394 | 0.319 |
| DS0c | 1.765 | 1.948 |
| GP01 | 1.303 | -1.498 |
| GP02 | 0.45 | 0.621 |
| GP0c | -0.049 | -0.971 |
| NOD | -1.172 | 0.0 |
| NZO | -0.808 | -0.936 |
| PWK | -0.59 | -0.604 |
| H37Rv_KO_CtpC | 0.916 | 1.727 |
| H37Rv_KO_CtpD | 2.149 | 1.357 |
| H37Rv_KO_Rv1272 | 1.172 | 1.778 |
| H37Rv_KO_SugABC | 0.42 | 0.484 |
| H37Rv_KO_MbtN | 2.278 | 0.366 |
| Trans05 | 0.707 | 2.226 |
| macrophage_unactivated | -0.398 | 1.521 |
| IL1 | 0.0 | 1.13 |
| Rapamycin | -1.034 | 0.322 |
| Tcell | -0.411 | 0.736 |
| GMCSF | 0.85 | 2.141 |
| IFNab | -0.381 | 0.955 |
| IFNg | 0.307 | 0.142 |
| IFNg_GMCSF1 | 0.0 | 0.562 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | -0.161 | 0.294 |
| secA2_input | -1.675 | -1.924 |
| delta_Rv3594 | -0.125 | 0.525 |
| delta_Rv3717 | 0.098 | -0.391 |
| delta_Rv3811 | -0.59 | 0.433 |
| delta_Rv0954 | -0.606 | -1.914 |
| PonA1 | -0.34 | -0.627 |
| EccD1_KO | -0.802 | 1.388 |
| EspI_KO | 0.973 | 1.614 |
| PE35_KO | 0.443 | 1.873 |
| PPE68_KO | 0.394 | 1.747 |
| glycerol2 | 0.0 | 0.96 |
| lignocerate | 0.168 | 0.856 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 0.0 | 0.696 |
| acetate | 0.0 | 1.139 |
| glucAc | 0.0 | 0.762 |
| Rv0950ko | -1.203 | -0.736 |
| Rv1096ko | 0.148 | -0.875 |
| Rv3684ko | -1.307 | -0.187 |
| delta_otsA_trehalose | 0.629 | -2.417 |