Top 10 genes with highest correlation to Rv1677/dsbF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0506/mmpS2 | (cc=0.4474) | info on Rv0506/mmpS2 |
| Rv1068c/PE_PGRS20 | (cc=0.4223) | info on Rv1068c/PE_PGRS20 |
| Rv1899c/lppD | (cc=0.4029) | info on Rv1899c/lppD |
| Rv1427c/fadD12 | (cc=0.3955) | info on Rv1427c/fadD12 |
| Rv2004c/- | (cc=0.3943) | info on Rv2004c/- |
| Rv1670/- | (cc=0.3927) | info on Rv1670/- |
| Rv1916/aceAb | (cc=0.3886) | info on Rv1916/aceAb |
| Rv0064A/vapB1 | (cc=0.3791) | info on Rv0064A/vapB1 |
| Rv2436/rbsK | (cc=0.3763) | info on Rv2436/rbsK |
| Rv2549c/vapC20 | (cc=0.3737) | info on Rv2549c/vapC20 |
Correlation of Rv1677/dsbF with Rv1670/-
Normalized LFCs for Rv1677/dsbF:
(description and provenance of datasets)
| Rv1677/dsbF | Rv1670/- | |
| Fe_supp_jason_reseq | 0.188 | 0.159 |
| low_pH_jason_reseq | 0.381 | 0.853 |
| NO_jason_reseq | 0.0 | -0.336 |
| B6_jason_reseq | -0.743 | -0.578 |
| MHCII_jason_reseq | -0.655 | -0.336 |
| Isoniazid02 | -1.352 | -1.702 |
| Rifampicin4 | 0.303 | -0.366 |
| Ethambutol3 | -1.345 | -0.933 |
| Meropenem3 | -1.701 | -1.155 |
| Vancomycin16 | -0.239 | -0.576 |
| Rv2680_day32 | 3.254 | 1.862 |
| H37Rv_KO_MarP | 0.313 | 0.041 |
| hypoxia_3wks | 1.344 | 0.411 |
| hypoxia_6wks | 0.301 | 0.626 |
| glycerol | 0.471 | -0.295 |
| cholesterol | 1.022 | 0.577 |
| AJ | -0.274 | 0.234 |
| Bibs02 | -0.294 | 0.984 |
| Bibs02c | -0.079 | 0.811 |
| BL6 | -0.906 | -1.179 |
| BL6a | -1.291 | -0.451 |
| BXD01 | -0.944 | 0.009 |
| BXD010 | -1.134 | -1.115 |
| BXD011 | 0.824 | -0.615 |
| BXD03 | -0.79 | 0.286 |
| BXD04 | -0.434 | -1.143 |
| BXD05 | 0.0 | 0.216 |
| BXD06 | -0.87 | -1.258 |
| BXD07 | 0.323 | -0.603 |
| BXD08 | 0.35 | 0.734 |
| BXD09 | 0.102 | -1.018 |
| CAST | -0.809 | 0.4 |
| CCcont | -1.198 | -0.72 |
| DS01 | -0.089 | 0.486 |
| DS02 | 1.843 | 1.583 |
| DS04 | 0.394 | 0.447 |
| DS0c | 1.765 | 1.436 |
| GP01 | 1.303 | 1.015 |
| GP02 | 0.45 | 0.636 |
| GP0c | -0.049 | -0.551 |
| NOD | -1.172 | 0.317 |
| NZO | -0.808 | 0.03 |
| PWK | -0.59 | 0.946 |
| H37Rv_KO_CtpC | 0.916 | -0.4 |
| H37Rv_KO_CtpD | 2.149 | 1.254 |
| H37Rv_KO_Rv1272 | 1.172 | -0.403 |
| H37Rv_KO_SugABC | 0.42 | -0.216 |
| H37Rv_KO_MbtN | 2.278 | -1.361 |
| Trans05 | 0.707 | 0.4 |
| macrophage_unactivated | -0.398 | -0.234 |
| IL1 | 0.0 | 2.554 |
| Rapamycin | -1.034 | -0.227 |
| Tcell | -0.411 | -0.583 |
| GMCSF | 0.85 | -0.694 |
| IFNab | -0.381 | 0.073 |
| IFNg | 0.307 | -0.131 |
| IFNg_GMCSF1 | 0.0 | -0.647 |
| Rv1432_day32 | 0.0 | -0.575 |
| Rv1565c_day32 | -0.161 | -1.366 |
| secA2_input | -1.675 | 0.316 |
| delta_Rv3594 | -0.125 | 0.337 |
| delta_Rv3717 | 0.098 | 0.053 |
| delta_Rv3811 | -0.59 | -0.116 |
| delta_Rv0954 | -0.606 | 0.497 |
| PonA1 | -0.34 | 0.0 |
| EccD1_KO | -0.802 | 0.743 |
| EspI_KO | 0.973 | 0.285 |
| PE35_KO | 0.443 | 0.636 |
| PPE68_KO | 0.394 | -0.093 |
| glycerol2 | 0.0 | -0.135 |
| lignocerate | 0.168 | -0.634 |
| oleate | 0.0 | 0.237 |
| phosphatidylcholine | 0.0 | -0.34 |
| acetate | 0.0 | -0.477 |
| glucAc | 0.0 | -1.143 |
| Rv0950ko | -1.203 | 0.392 |
| Rv1096ko | 0.148 | -0.911 |
| Rv3684ko | -1.307 | -0.354 |
| delta_otsA_trehalose | 0.629 | 0.817 |