Top 10 genes with highest correlation to Rv1675c/cmr:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0373c/- | (cc=0.5903) | info on Rv0373c/- |
| Rv0338c/- | (cc=0.5732) | info on Rv0338c/- |
| Rv0063/- | (cc=0.5603) | info on Rv0063/- |
| Rv0320/- | (cc=0.5585) | info on Rv0320/- |
| Rv2268c/cyp128 | (cc=0.4947) | info on Rv2268c/cyp128 |
| Rv2431c/PE25 | (cc=0.481) | info on Rv2431c/PE25 |
| Rv3624c/hpt | (cc=0.4743) | info on Rv3624c/hpt |
| Rv0625c/- | (cc=0.4709) | info on Rv0625c/- |
| Rv1701/- | (cc=0.4669) | info on Rv1701/- |
| Rv3844/- | (cc=0.4656) | info on Rv3844/- |
Correlation of Rv1675c/cmr with Rv1701/-
Normalized LFCs for Rv1675c/cmr:
(description and provenance of datasets)
| Rv1675c/cmr | Rv1701/- | |
| Fe_supp_jason_reseq | -0.17 | 0.538 |
| low_pH_jason_reseq | 0.0 | -0.345 |
| NO_jason_reseq | 0.179 | 0.0 |
| B6_jason_reseq | -0.162 | -0.649 |
| MHCII_jason_reseq | 1.183 | -0.315 |
| Isoniazid02 | -0.63 | 0.63 |
| Rifampicin4 | -1.124 | -1.995 |
| Ethambutol3 | -0.786 | -1.048 |
| Meropenem3 | -0.394 | -0.744 |
| Vancomycin16 | -0.613 | -0.512 |
| Rv2680_day32 | -0.08 | -0.459 |
| H37Rv_KO_MarP | 0.109 | -1.205 |
| hypoxia_3wks | -0.805 | -0.722 |
| hypoxia_6wks | -0.464 | -0.808 |
| glycerol | 1.179 | 2.741 |
| cholesterol | 5.239 | 2.486 |
| AJ | 0.371 | -0.442 |
| Bibs02 | 0.306 | -0.167 |
| Bibs02c | 1.015 | -0.399 |
| BL6 | 0.303 | -0.114 |
| BL6a | 0.317 | -0.181 |
| BXD01 | -1.107 | -0.248 |
| BXD010 | -0.084 | -0.244 |
| BXD011 | 0.143 | 0.0 |
| BXD03 | 0.357 | 0.113 |
| BXD04 | -1.13 | -0.236 |
| BXD05 | 0.645 | 0.0 |
| BXD06 | 0.693 | -0.254 |
| BXD07 | 0.232 | 0.0 |
| BXD08 | -0.671 | -0.253 |
| BXD09 | 0.012 | -0.268 |
| CAST | 0.507 | -0.439 |
| CCcont | -0.82 | 2.164 |
| DS01 | 0.145 | -0.45 |
| DS02 | 0.153 | 0.0 |
| DS04 | 0.839 | 0.0 |
| DS0c | 0.244 | -0.413 |
| GP01 | -0.23 | -0.188 |
| GP02 | -1.06 | -0.159 |
| GP0c | -0.333 | 0.303 |
| NOD | -0.021 | -0.205 |
| NZO | 0.649 | -0.38 |
| PWK | -0.054 | -0.374 |
| H37Rv_KO_CtpC | 0.272 | -0.148 |
| H37Rv_KO_CtpD | 0.99 | 0.295 |
| H37Rv_KO_Rv1272 | -0.554 | -0.129 |
| H37Rv_KO_SugABC | -1.147 | 0.0 |
| H37Rv_KO_MbtN | -1.313 | 0.0 |
| Trans05 | 0.934 | -0.119 |
| macrophage_unactivated | -0.944 | 0.0 |
| IL1 | -0.222 | -0.374 |
| Rapamycin | -0.724 | -0.387 |
| Tcell | -1.274 | 0.0 |
| GMCSF | 0.789 | 0.0 |
| IFNab | 0.094 | 0.0 |
| IFNg | -0.23 | 0.307 |
| IFNg_GMCSF1 | 0.097 | -0.396 |
| Rv1432_day32 | -2.941 | 0.0 |
| Rv1565c_day32 | 0.619 | -1.339 |
| secA2_input | -0.739 | -0.423 |
| delta_Rv3594 | 0.058 | 0.281 |
| delta_Rv3717 | -0.292 | -0.415 |
| delta_Rv3811 | 0.909 | -0.553 |
| delta_Rv0954 | -1.012 | 0.163 |
| PonA1 | 0.705 | -0.753 |
| EccD1_KO | -0.184 | -2.529 |
| EspI_KO | -1.728 | -1.76 |
| PE35_KO | -0.697 | -0.805 |
| PPE68_KO | -1.142 | -1.133 |
| glycerol2 | -2.609 | -1.712 |
| lignocerate | -0.756 | -1.348 |
| oleate | -2.64 | -1.911 |
| phosphatidylcholine | -1.852 | -1.711 |
| acetate | 0.06 | -0.178 |
| glucAc | -0.242 | 0.375 |
| Rv0950ko | 0.199 | -0.814 |
| Rv1096ko | -0.721 | -0.446 |
| Rv3684ko | 0.111 | -1.32 |
| delta_otsA_trehalose | -0.987 | -0.311 |