Top 10 genes with highest correlation to Rv1675c/cmr:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0373c/- | (cc=0.5903) | info on Rv0373c/- |
| Rv0338c/- | (cc=0.5732) | info on Rv0338c/- |
| Rv0063/- | (cc=0.5603) | info on Rv0063/- |
| Rv0320/- | (cc=0.5585) | info on Rv0320/- |
| Rv2268c/cyp128 | (cc=0.4947) | info on Rv2268c/cyp128 |
| Rv2431c/PE25 | (cc=0.481) | info on Rv2431c/PE25 |
| Rv3624c/hpt | (cc=0.4743) | info on Rv3624c/hpt |
| Rv0625c/- | (cc=0.4709) | info on Rv0625c/- |
| Rv1701/- | (cc=0.4669) | info on Rv1701/- |
| Rv3844/- | (cc=0.4656) | info on Rv3844/- |
Correlation of Rv1675c/cmr with Rv0063/-
Normalized LFCs for Rv1675c/cmr:
(description and provenance of datasets)
| Rv1675c/cmr | Rv0063/- | |
| Fe_supp_jason_reseq | -0.17 | -0.568 |
| low_pH_jason_reseq | 0.0 | -0.172 |
| NO_jason_reseq | 0.179 | -0.026 |
| B6_jason_reseq | -0.162 | 0.872 |
| MHCII_jason_reseq | 1.183 | 0.139 |
| Isoniazid02 | -0.63 | -0.228 |
| Rifampicin4 | -1.124 | 0.0 |
| Ethambutol3 | -0.786 | -0.134 |
| Meropenem3 | -0.394 | 0.037 |
| Vancomycin16 | -0.613 | 0.218 |
| Rv2680_day32 | -0.08 | -0.874 |
| H37Rv_KO_MarP | 0.109 | 0.775 |
| hypoxia_3wks | -0.805 | -0.805 |
| hypoxia_6wks | -0.464 | -0.24 |
| glycerol | 1.179 | 1.176 |
| cholesterol | 5.239 | 2.914 |
| AJ | 0.371 | 0.788 |
| Bibs02 | 0.306 | -0.029 |
| Bibs02c | 1.015 | 0.587 |
| BL6 | 0.303 | 0.621 |
| BL6a | 0.317 | 0.43 |
| BXD01 | -1.107 | -0.098 |
| BXD010 | -0.084 | 0.261 |
| BXD011 | 0.143 | 0.587 |
| BXD03 | 0.357 | 0.756 |
| BXD04 | -1.13 | 0.354 |
| BXD05 | 0.645 | 0.599 |
| BXD06 | 0.693 | 0.043 |
| BXD07 | 0.232 | 0.148 |
| BXD08 | -0.671 | 0.011 |
| BXD09 | 0.012 | -0.046 |
| CAST | 0.507 | 0.516 |
| CCcont | -0.82 | 0.07 |
| DS01 | 0.145 | 1.136 |
| DS02 | 0.153 | 0.726 |
| DS04 | 0.839 | 1.318 |
| DS0c | 0.244 | 0.662 |
| GP01 | -0.23 | 0.201 |
| GP02 | -1.06 | -0.748 |
| GP0c | -0.333 | -0.251 |
| NOD | -0.021 | 1.36 |
| NZO | 0.649 | 0.446 |
| PWK | -0.054 | 0.924 |
| H37Rv_KO_CtpC | 0.272 | 0.0 |
| H37Rv_KO_CtpD | 0.99 | -0.283 |
| H37Rv_KO_Rv1272 | -0.554 | -0.233 |
| H37Rv_KO_SugABC | -1.147 | 0.942 |
| H37Rv_KO_MbtN | -1.313 | 0.276 |
| Trans05 | 0.934 | -0.548 |
| macrophage_unactivated | -0.944 | -0.363 |
| IL1 | -0.222 | -0.053 |
| Rapamycin | -0.724 | -0.835 |
| Tcell | -1.274 | -0.606 |
| GMCSF | 0.789 | 0.166 |
| IFNab | 0.094 | 0.0 |
| IFNg | -0.23 | -0.048 |
| IFNg_GMCSF1 | 0.097 | -0.088 |
| Rv1432_day32 | -2.941 | -0.089 |
| Rv1565c_day32 | 0.619 | 0.351 |
| secA2_input | -0.739 | 0.095 |
| delta_Rv3594 | 0.058 | -0.159 |
| delta_Rv3717 | -0.292 | -0.458 |
| delta_Rv3811 | 0.909 | -0.607 |
| delta_Rv0954 | -1.012 | 0.522 |
| PonA1 | 0.705 | 0.658 |
| EccD1_KO | -0.184 | -0.178 |
| EspI_KO | -1.728 | -0.317 |
| PE35_KO | -0.697 | 0.271 |
| PPE68_KO | -1.142 | 0.266 |
| glycerol2 | -2.609 | 0.048 |
| lignocerate | -0.756 | 0.664 |
| oleate | -2.64 | -1.212 |
| phosphatidylcholine | -1.852 | -0.253 |
| acetate | 0.06 | 0.484 |
| glucAc | -0.242 | 0.575 |
| Rv0950ko | 0.199 | 0.425 |
| Rv1096ko | -0.721 | 0.392 |
| Rv3684ko | 0.111 | 0.747 |
| delta_otsA_trehalose | -0.987 | -0.535 |