Top 10 genes with highest correlation to Rv1668c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2306A/- | (cc=0.491) | info on Rv2306A/- |
| Rv1746/pknF | (cc=0.4855) | info on Rv1746/pknF |
| Rv1999c/- | (cc=0.4788) | info on Rv1999c/- |
| Rv3568c/hsaC | (cc=0.4727) | info on Rv3568c/hsaC |
| Rv1563c/treY | (cc=0.4707) | info on Rv1563c/treY |
| Rv3416/whiB3 | (cc=0.4656) | info on Rv3416/whiB3 |
| Rv0969/ctpV | (cc=0.4602) | info on Rv0969/ctpV |
| Rv3493c/- | (cc=0.4502) | info on Rv3493c/- |
| Rv3898c/- | (cc=0.4406) | info on Rv3898c/- |
| Rv0306/- | (cc=0.4359) | info on Rv0306/- |
Correlation of Rv1668c/- with Rv1746/pknF
Normalized LFCs for Rv1668c/-:
(description and provenance of datasets)
| Rv1668c/- | Rv1746/pknF | |
| Fe_supp_jason_reseq | -0.14 | 0.62 |
| low_pH_jason_reseq | -1.139 | 0.612 |
| NO_jason_reseq | -1.037 | 0.391 |
| B6_jason_reseq | -0.204 | 0.103 |
| MHCII_jason_reseq | 0.093 | 0.881 |
| Isoniazid02 | -0.02 | 0.167 |
| Rifampicin4 | 0.382 | -0.252 |
| Ethambutol3 | 0.792 | -0.263 |
| Meropenem3 | 0.048 | 0.071 |
| Vancomycin16 | 0.31 | -0.602 |
| Rv2680_day32 | 0.044 | 0.196 |
| H37Rv_KO_MarP | -0.045 | 0.344 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | 0.309 | -0.115 |
| glycerol | 0.563 | -0.547 |
| cholesterol | -0.304 | -0.548 |
| AJ | 0.097 | -0.18 |
| Bibs02 | -0.234 | -0.294 |
| Bibs02c | 0.036 | -0.293 |
| BL6 | 0.022 | -0.42 |
| BL6a | -0.963 | -0.95 |
| BXD01 | -0.513 | -0.188 |
| BXD010 | -0.695 | -0.555 |
| BXD011 | -0.47 | -0.502 |
| BXD03 | -0.585 | -0.229 |
| BXD04 | -0.368 | -0.131 |
| BXD05 | -0.496 | -0.154 |
| BXD06 | -0.649 | -0.306 |
| BXD07 | -0.922 | 0.156 |
| BXD08 | -0.279 | -0.108 |
| BXD09 | -0.554 | -0.315 |
| CAST | -0.342 | -0.506 |
| CCcont | -0.207 | -0.689 |
| DS01 | -0.281 | -0.154 |
| DS02 | 0.38 | -0.466 |
| DS04 | -0.555 | -0.295 |
| DS0c | -0.195 | -0.041 |
| GP01 | 0.158 | -0.235 |
| GP02 | -0.64 | -0.109 |
| GP0c | 0.591 | -0.43 |
| NOD | -0.669 | -0.314 |
| NZO | 0.433 | -0.195 |
| PWK | -0.141 | -0.112 |
| H37Rv_KO_CtpC | -0.978 | -0.928 |
| H37Rv_KO_CtpD | -1.803 | -1.35 |
| H37Rv_KO_Rv1272 | -0.062 | 0.731 |
| H37Rv_KO_SugABC | 0.619 | 0.826 |
| H37Rv_KO_MbtN | -0.653 | -1.247 |
| Trans05 | -0.023 | -0.251 |
| macrophage_unactivated | -0.571 | -0.312 |
| IL1 | 0.418 | -0.51 |
| Rapamycin | 0.648 | -0.304 |
| Tcell | -1.268 | -0.169 |
| GMCSF | 1.349 | 0.85 |
| IFNab | 0.813 | -0.181 |
| IFNg | -0.155 | -0.16 |
| IFNg_GMCSF1 | 0.506 | 0.091 |
| Rv1432_day32 | 0.756 | 0.441 |
| Rv1565c_day32 | -0.714 | -0.284 |
| secA2_input | -0.836 | 0.0 |
| delta_Rv3594 | 0.236 | 0.688 |
| delta_Rv3717 | 0.497 | 0.306 |
| delta_Rv3811 | 0.455 | 0.049 |
| delta_Rv0954 | -0.295 | 0.633 |
| PonA1 | -0.157 | 1.18 |
| EccD1_KO | 2.204 | 1.746 |
| EspI_KO | 0.359 | 0.838 |
| PE35_KO | 0.621 | 0.359 |
| PPE68_KO | 0.682 | 0.394 |
| glycerol2 | 0.549 | -0.688 |
| lignocerate | 0.279 | 0.018 |
| oleate | 1.11 | 0.427 |
| phosphatidylcholine | 0.357 | 0.273 |
| acetate | 0.402 | -0.648 |
| glucAc | 0.137 | -0.374 |
| Rv0950ko | -0.311 | 0.0 |
| Rv1096ko | -0.516 | -0.688 |
| Rv3684ko | 0.082 | -0.684 |
| delta_otsA_trehalose | 2.635 | 1.078 |