Top 10 genes with highest correlation to Rv1668c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2306A/- | (cc=0.491) | info on Rv2306A/- |
| Rv1746/pknF | (cc=0.4855) | info on Rv1746/pknF |
| Rv1999c/- | (cc=0.4788) | info on Rv1999c/- |
| Rv3568c/hsaC | (cc=0.4727) | info on Rv3568c/hsaC |
| Rv1563c/treY | (cc=0.4707) | info on Rv1563c/treY |
| Rv3416/whiB3 | (cc=0.4656) | info on Rv3416/whiB3 |
| Rv0969/ctpV | (cc=0.4602) | info on Rv0969/ctpV |
| Rv3493c/- | (cc=0.4502) | info on Rv3493c/- |
| Rv3898c/- | (cc=0.4406) | info on Rv3898c/- |
| Rv0306/- | (cc=0.4359) | info on Rv0306/- |
Correlation of Rv1668c/- with Rv2306A/-
Normalized LFCs for Rv1668c/-:
(description and provenance of datasets)
| Rv1668c/- | Rv2306A/- | |
| Fe_supp_jason_reseq | -0.14 | 0.137 |
| low_pH_jason_reseq | -1.139 | -0.84 |
| NO_jason_reseq | -1.037 | -0.181 |
| B6_jason_reseq | -0.204 | 0.072 |
| MHCII_jason_reseq | 0.093 | 0.82 |
| Isoniazid02 | -0.02 | -2.04 |
| Rifampicin4 | 0.382 | 0.704 |
| Ethambutol3 | 0.792 | -0.251 |
| Meropenem3 | 0.048 | -2.001 |
| Vancomycin16 | 0.31 | -0.775 |
| Rv2680_day32 | 0.044 | -0.251 |
| H37Rv_KO_MarP | -0.045 | -0.167 |
| hypoxia_3wks | 0.0 | 0.116 |
| hypoxia_6wks | 0.309 | 0.238 |
| glycerol | 0.563 | 0.648 |
| cholesterol | -0.304 | -0.308 |
| AJ | 0.097 | -0.35 |
| Bibs02 | -0.234 | 0.351 |
| Bibs02c | 0.036 | 0.044 |
| BL6 | 0.022 | -0.773 |
| BL6a | -0.963 | -1.02 |
| BXD01 | -0.513 | -1.194 |
| BXD010 | -0.695 | -1.663 |
| BXD011 | -0.47 | -1.074 |
| BXD03 | -0.585 | -0.844 |
| BXD04 | -0.368 | -1.122 |
| BXD05 | -0.496 | -1.427 |
| BXD06 | -0.649 | -0.841 |
| BXD07 | -0.922 | -0.984 |
| BXD08 | -0.279 | -0.991 |
| BXD09 | -0.554 | -1.11 |
| CAST | -0.342 | -0.442 |
| CCcont | -0.207 | -1.093 |
| DS01 | -0.281 | 0.77 |
| DS02 | 0.38 | 0.405 |
| DS04 | -0.555 | 0.902 |
| DS0c | -0.195 | 0.442 |
| GP01 | 0.158 | 0.402 |
| GP02 | -0.64 | 0.034 |
| GP0c | 0.591 | 0.234 |
| NOD | -0.669 | -0.722 |
| NZO | 0.433 | -0.16 |
| PWK | -0.141 | 0.466 |
| H37Rv_KO_CtpC | -0.978 | -0.66 |
| H37Rv_KO_CtpD | -1.803 | -1.238 |
| H37Rv_KO_Rv1272 | -0.062 | -0.907 |
| H37Rv_KO_SugABC | 0.619 | -0.789 |
| H37Rv_KO_MbtN | -0.653 | -0.611 |
| Trans05 | -0.023 | -0.427 |
| macrophage_unactivated | -0.571 | -0.382 |
| IL1 | 0.418 | -1.261 |
| Rapamycin | 0.648 | -0.672 |
| Tcell | -1.268 | -1.3 |
| GMCSF | 1.349 | -0.607 |
| IFNab | 0.813 | -0.837 |
| IFNg | -0.155 | -0.676 |
| IFNg_GMCSF1 | 0.506 | -0.795 |
| Rv1432_day32 | 0.756 | 0.379 |
| Rv1565c_day32 | -0.714 | -0.526 |
| secA2_input | -0.836 | -0.57 |
| delta_Rv3594 | 0.236 | -0.323 |
| delta_Rv3717 | 0.497 | -0.369 |
| delta_Rv3811 | 0.455 | 0.076 |
| delta_Rv0954 | -0.295 | -0.665 |
| PonA1 | -0.157 | -0.989 |
| EccD1_KO | 2.204 | 0.954 |
| EspI_KO | 0.359 | 0.955 |
| PE35_KO | 0.621 | 0.767 |
| PPE68_KO | 0.682 | 0.554 |
| glycerol2 | 0.549 | -0.059 |
| lignocerate | 0.279 | -0.201 |
| oleate | 1.11 | 0.717 |
| phosphatidylcholine | 0.357 | 0.196 |
| acetate | 0.402 | 0.04 |
| glucAc | 0.137 | -0.351 |
| Rv0950ko | -0.311 | 0.501 |
| Rv1096ko | -0.516 | -0.287 |
| Rv3684ko | 0.082 | 0.606 |
| delta_otsA_trehalose | 2.635 | 1.441 |