Top 10 genes with highest correlation to Rv1657/argR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0428c/- | (cc=0.661) | info on Rv0428c/- |
| Rv1323/fadA4 | (cc=0.6534) | info on Rv1323/fadA4 |
| Rv1070c/echA8 | (cc=0.6382) | info on Rv1070c/echA8 |
| Rv2681/- | (cc=0.624) | info on Rv2681/- |
| Rv3651/- | (cc=0.6184) | info on Rv3651/- |
| Rv0406c/- | (cc=0.6161) | info on Rv0406c/- |
| Rv0465c/- | (cc=0.6059) | info on Rv0465c/- |
| Rv2141c/- | (cc=0.5856) | info on Rv2141c/- |
| Rv2564/glnQ | (cc=0.5815) | info on Rv2564/glnQ |
| Rv3354/- | (cc=0.5718) | info on Rv3354/- |
Correlation of Rv1657/argR with Rv3651/-
Normalized LFCs for Rv1657/argR:
(description and provenance of datasets)
| Rv1657/argR | Rv3651/- | |
| Fe_supp_jason_reseq | -1.639 | 0.923 |
| low_pH_jason_reseq | -2.076 | -0.979 |
| NO_jason_reseq | -1.801 | -2.625 |
| B6_jason_reseq | 0.006 | -0.496 |
| MHCII_jason_reseq | 0.433 | -0.503 |
| Isoniazid02 | 0.969 | -0.528 |
| Rifampicin4 | 0.479 | -1.584 |
| Ethambutol3 | 0.495 | -0.64 |
| Meropenem3 | -0.157 | 1.677 |
| Vancomycin16 | 0.0 | -0.828 |
| Rv2680_day32 | -2.613 | -0.883 |
| H37Rv_KO_MarP | 0.363 | 0.674 |
| hypoxia_3wks | -1.192 | -2.333 |
| hypoxia_6wks | -1.656 | -1.894 |
| glycerol | 1.641 | 2.73 |
| cholesterol | -0.061 | 1.434 |
| AJ | -1.037 | 0.918 |
| Bibs02 | -0.156 | 0.525 |
| Bibs02c | -1.432 | 1.682 |
| BL6 | -2.797 | -2.121 |
| BL6a | -2.043 | 0.63 |
| BXD01 | -2.399 | -1.751 |
| BXD010 | -1.531 | -2.715 |
| BXD011 | -3.232 | -2.35 |
| BXD03 | -2.075 | -1.959 |
| BXD04 | -1.329 | -2.187 |
| BXD05 | -1.63 | -2.282 |
| BXD06 | -2.42 | -2.463 |
| BXD07 | -2.322 | -2.348 |
| BXD08 | -2.3 | -1.202 |
| BXD09 | -3.271 | -2.036 |
| CAST | -0.556 | 0.297 |
| CCcont | -0.936 | -0.318 |
| DS01 | 0.441 | 2.156 |
| DS02 | -0.581 | 2.046 |
| DS04 | 0.476 | 1.941 |
| DS0c | 0.097 | 2.549 |
| GP01 | -0.916 | 0.873 |
| GP02 | -1.791 | -0.752 |
| GP0c | -1.533 | -0.255 |
| NOD | -0.69 | 1.206 |
| NZO | -2.384 | -0.172 |
| PWK | 0.21 | 0.18 |
| H37Rv_KO_CtpC | 0.128 | -0.459 |
| H37Rv_KO_CtpD | -3.369 | -0.358 |
| H37Rv_KO_Rv1272 | -1.829 | -2.989 |
| H37Rv_KO_SugABC | -0.995 | -1.491 |
| H37Rv_KO_MbtN | -1.995 | -1.493 |
| Trans05 | -3.393 | -2.769 |
| macrophage_unactivated | -1.626 | -0.35 |
| IL1 | -0.955 | -1.284 |
| Rapamycin | -1.402 | -2.047 |
| Tcell | -1.307 | -1.906 |
| GMCSF | -2.038 | -0.958 |
| IFNab | -0.357 | -1.533 |
| IFNg | -2.51 | -1.783 |
| IFNg_GMCSF1 | -2.055 | 0.0 |
| Rv1432_day32 | -3.331 | -0.632 |
| Rv1565c_day32 | -0.025 | 0.706 |
| secA2_input | 0.24 | 0.736 |
| delta_Rv3594 | -0.378 | 0.938 |
| delta_Rv3717 | -1.114 | 0.384 |
| delta_Rv3811 | -1.735 | -0.129 |
| delta_Rv0954 | 0.362 | 2.766 |
| PonA1 | -0.268 | 0.77 |
| EccD1_KO | 0.694 | 0.77 |
| EspI_KO | 1.483 | 1.243 |
| PE35_KO | 0.499 | 2.051 |
| PPE68_KO | -0.029 | 0.749 |
| glycerol2 | 0.017 | -0.588 |
| lignocerate | -0.774 | -0.605 |
| oleate | -1.198 | -0.819 |
| phosphatidylcholine | -1.566 | -0.296 |
| acetate | -0.509 | 0.326 |
| glucAc | -0.921 | -0.686 |
| Rv0950ko | -0.787 | -0.217 |
| Rv1096ko | 0.528 | 1.279 |
| Rv3684ko | -0.586 | 1.3 |
| delta_otsA_trehalose | -0.58 | 1.864 |