Top 10 genes with highest correlation to Rv1657/argR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0428c/- | (cc=0.661) | info on Rv0428c/- |
| Rv1323/fadA4 | (cc=0.6534) | info on Rv1323/fadA4 |
| Rv1070c/echA8 | (cc=0.6382) | info on Rv1070c/echA8 |
| Rv2681/- | (cc=0.624) | info on Rv2681/- |
| Rv3651/- | (cc=0.6184) | info on Rv3651/- |
| Rv0406c/- | (cc=0.6161) | info on Rv0406c/- |
| Rv0465c/- | (cc=0.6059) | info on Rv0465c/- |
| Rv2141c/- | (cc=0.5856) | info on Rv2141c/- |
| Rv2564/glnQ | (cc=0.5815) | info on Rv2564/glnQ |
| Rv3354/- | (cc=0.5718) | info on Rv3354/- |
Correlation of Rv1657/argR with Rv2141c/-
Normalized LFCs for Rv1657/argR:
(description and provenance of datasets)
| Rv1657/argR | Rv2141c/- | |
| Fe_supp_jason_reseq | -1.639 | -0.224 |
| low_pH_jason_reseq | -2.076 | -1.116 |
| NO_jason_reseq | -1.801 | -3.187 |
| B6_jason_reseq | 0.006 | -0.399 |
| MHCII_jason_reseq | 0.433 | 0.112 |
| Isoniazid02 | 0.969 | 0.802 |
| Rifampicin4 | 0.479 | 0.341 |
| Ethambutol3 | 0.495 | 1.085 |
| Meropenem3 | -0.157 | 0.208 |
| Vancomycin16 | 0.0 | 0.276 |
| Rv2680_day32 | -2.613 | -1.012 |
| H37Rv_KO_MarP | 0.363 | 0.278 |
| hypoxia_3wks | -1.192 | -0.722 |
| hypoxia_6wks | -1.656 | -0.24 |
| glycerol | 1.641 | 0.489 |
| cholesterol | -0.061 | -0.556 |
| AJ | -1.037 | -0.013 |
| Bibs02 | -0.156 | -0.266 |
| Bibs02c | -1.432 | 0.534 |
| BL6 | -2.797 | -0.106 |
| BL6a | -2.043 | 0.043 |
| BXD01 | -2.399 | -0.972 |
| BXD010 | -1.531 | -0.313 |
| BXD011 | -3.232 | -1.287 |
| BXD03 | -2.075 | -0.652 |
| BXD04 | -1.329 | 0.072 |
| BXD05 | -1.63 | -1.419 |
| BXD06 | -2.42 | -0.803 |
| BXD07 | -2.322 | -1.18 |
| BXD08 | -2.3 | -0.532 |
| BXD09 | -3.271 | -0.678 |
| CAST | -0.556 | -0.611 |
| CCcont | -0.936 | -0.609 |
| DS01 | 0.441 | 0.631 |
| DS02 | -0.581 | -0.134 |
| DS04 | 0.476 | -0.097 |
| DS0c | 0.097 | 0.911 |
| GP01 | -0.916 | -0.084 |
| GP02 | -1.791 | -0.63 |
| GP0c | -1.533 | -0.583 |
| NOD | -0.69 | -0.327 |
| NZO | -2.384 | -0.487 |
| PWK | 0.21 | 0.193 |
| H37Rv_KO_CtpC | 0.128 | -0.247 |
| H37Rv_KO_CtpD | -3.369 | -0.233 |
| H37Rv_KO_Rv1272 | -1.829 | 0.207 |
| H37Rv_KO_SugABC | -0.995 | 0.788 |
| H37Rv_KO_MbtN | -1.995 | -0.317 |
| Trans05 | -3.393 | -0.073 |
| macrophage_unactivated | -1.626 | -0.439 |
| IL1 | -0.955 | -0.543 |
| Rapamycin | -1.402 | -0.252 |
| Tcell | -1.307 | 0.251 |
| GMCSF | -2.038 | -0.523 |
| IFNab | -0.357 | 0.0 |
| IFNg | -2.51 | -0.914 |
| IFNg_GMCSF1 | -2.055 | -0.622 |
| Rv1432_day32 | -3.331 | -1.05 |
| Rv1565c_day32 | -0.025 | 0.234 |
| secA2_input | 0.24 | 0.834 |
| delta_Rv3594 | -0.378 | -0.196 |
| delta_Rv3717 | -1.114 | -0.593 |
| delta_Rv3811 | -1.735 | -0.412 |
| delta_Rv0954 | 0.362 | -0.062 |
| PonA1 | -0.268 | -0.397 |
| EccD1_KO | 0.694 | 0.724 |
| EspI_KO | 1.483 | 0.077 |
| PE35_KO | 0.499 | 0.058 |
| PPE68_KO | -0.029 | -0.246 |
| glycerol2 | 0.017 | 0.97 |
| lignocerate | -0.774 | -0.552 |
| oleate | -1.198 | -0.323 |
| phosphatidylcholine | -1.566 | -0.811 |
| acetate | -0.509 | 0.587 |
| glucAc | -0.921 | -0.392 |
| Rv0950ko | -0.787 | 0.579 |
| Rv1096ko | 0.528 | 0.579 |
| Rv3684ko | -0.586 | 0.472 |
| delta_otsA_trehalose | -0.58 | 0.066 |