Top 10 genes with highest correlation to Rv1619/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2629/- | (cc=0.4767) | info on Rv2629/- |
| Rv1251c/- | (cc=0.4516) | info on Rv1251c/- |
| Rv0532/PE_PGRS6 | (cc=0.4451) | info on Rv0532/PE_PGRS6 |
| Rv1992c/ctpG | (cc=0.4375) | info on Rv1992c/ctpG |
| Rv0325/- | (cc=0.4338) | info on Rv0325/- |
| Rv3395A/- | (cc=0.4333) | info on Rv3395A/- |
| Rv3754/tyrA | (cc=0.4294) | info on Rv3754/tyrA |
| Rv3037c/- | (cc=0.4211) | info on Rv3037c/- |
| Rv1731/gabD2 | (cc=0.419) | info on Rv1731/gabD2 |
| Rv2769c/PE27 | (cc=0.4176) | info on Rv2769c/PE27 |
Correlation of Rv1619/- with Rv1731/gabD2
Normalized LFCs for Rv1619/-:
(description and provenance of datasets)
| Rv1619/- | Rv1731/gabD2 | |
| Fe_supp_jason_reseq | -1.058 | 1.414 |
| low_pH_jason_reseq | -1.176 | -0.234 |
| NO_jason_reseq | -0.055 | -0.496 |
| B6_jason_reseq | 0.571 | 0.968 |
| MHCII_jason_reseq | -0.899 | 0.922 |
| Isoniazid02 | 3.339 | 2.222 |
| Rifampicin4 | 0.341 | 0.612 |
| Ethambutol3 | 0.392 | 1.846 |
| Meropenem3 | 3.656 | 0.787 |
| Vancomycin16 | 0.252 | 0.485 |
| Rv2680_day32 | -1.614 | -0.77 |
| H37Rv_KO_MarP | 0.481 | 0.976 |
| hypoxia_3wks | 0.315 | -0.311 |
| hypoxia_6wks | 0.165 | -0.762 |
| glycerol | 0.097 | 0.143 |
| cholesterol | 0.26 | 0.103 |
| AJ | 0.217 | -0.844 |
| Bibs02 | 0.587 | -0.906 |
| Bibs02c | 1.164 | -0.126 |
| BL6 | -0.582 | -0.135 |
| BL6a | 1.231 | -0.679 |
| BXD01 | -0.746 | -0.878 |
| BXD010 | 0.081 | -0.388 |
| BXD011 | -0.439 | -0.631 |
| BXD03 | -1.273 | -1.159 |
| BXD04 | -0.062 | -0.293 |
| BXD05 | 0.366 | -0.531 |
| BXD06 | -0.161 | -0.527 |
| BXD07 | -0.51 | -0.787 |
| BXD08 | -0.236 | -0.512 |
| BXD09 | -1.113 | -0.89 |
| CAST | 0.284 | -0.609 |
| CCcont | -0.355 | -0.868 |
| DS01 | 0.113 | -0.313 |
| DS02 | -0.109 | -0.098 |
| DS04 | -0.583 | -0.257 |
| DS0c | 0.534 | -0.456 |
| GP01 | 0.256 | -0.752 |
| GP02 | -0.75 | -1.025 |
| GP0c | -0.605 | -1.226 |
| NOD | -0.724 | -0.392 |
| NZO | 0.386 | -0.247 |
| PWK | 0.0 | 0.098 |
| H37Rv_KO_CtpC | -0.598 | -1.118 |
| H37Rv_KO_CtpD | -1.755 | -1.473 |
| H37Rv_KO_Rv1272 | -0.25 | -0.469 |
| H37Rv_KO_SugABC | -0.388 | 0.11 |
| H37Rv_KO_MbtN | -1.102 | -0.511 |
| Trans05 | 0.727 | -1.015 |
| macrophage_unactivated | -0.398 | -1.117 |
| IL1 | -0.531 | -1.272 |
| Rapamycin | 0.868 | -0.365 |
| Tcell | -0.16 | -1.153 |
| GMCSF | -0.401 | -0.481 |
| IFNab | -0.541 | -1.182 |
| IFNg | 0.249 | -0.195 |
| IFNg_GMCSF1 | 0.569 | -1.471 |
| Rv1432_day32 | -0.795 | -0.086 |
| Rv1565c_day32 | 0.057 | 0.305 |
| secA2_input | -0.258 | -0.916 |
| delta_Rv3594 | 0.843 | -0.028 |
| delta_Rv3717 | 0.161 | -0.068 |
| delta_Rv3811 | 0.642 | 0.315 |
| delta_Rv0954 | 0.39 | 1.269 |
| PonA1 | 0.38 | 0.173 |
| EccD1_KO | 0.352 | 0.355 |
| EspI_KO | -0.781 | -0.108 |
| PE35_KO | 0.236 | 0.703 |
| PPE68_KO | 0.0 | 0.771 |
| glycerol2 | -0.188 | 0.398 |
| lignocerate | 0.255 | 1.058 |
| oleate | 0.554 | -0.679 |
| phosphatidylcholine | 0.513 | 0.73 |
| acetate | -0.342 | 0.938 |
| glucAc | 0.895 | 0.898 |
| Rv0950ko | -0.362 | 0.332 |
| Rv1096ko | 0.492 | 1.062 |
| Rv3684ko | 0.095 | 0.694 |
| delta_otsA_trehalose | -0.468 | 0.492 |