Top 10 genes with highest correlation to Rv1619/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2629/- | (cc=0.4767) | info on Rv2629/- |
| Rv1251c/- | (cc=0.4516) | info on Rv1251c/- |
| Rv0532/PE_PGRS6 | (cc=0.4451) | info on Rv0532/PE_PGRS6 |
| Rv1992c/ctpG | (cc=0.4375) | info on Rv1992c/ctpG |
| Rv0325/- | (cc=0.4338) | info on Rv0325/- |
| Rv3395A/- | (cc=0.4333) | info on Rv3395A/- |
| Rv3754/tyrA | (cc=0.4294) | info on Rv3754/tyrA |
| Rv3037c/- | (cc=0.4211) | info on Rv3037c/- |
| Rv1731/gabD2 | (cc=0.419) | info on Rv1731/gabD2 |
| Rv2769c/PE27 | (cc=0.4176) | info on Rv2769c/PE27 |
Correlation of Rv1619/- with Rv2629/-
Normalized LFCs for Rv1619/-:
(description and provenance of datasets)
| Rv1619/- | Rv2629/- | |
| Fe_supp_jason_reseq | -1.058 | -0.592 |
| low_pH_jason_reseq | -1.176 | -0.293 |
| NO_jason_reseq | -0.055 | 0.197 |
| B6_jason_reseq | 0.571 | 0.216 |
| MHCII_jason_reseq | -0.899 | 0.084 |
| Isoniazid02 | 3.339 | 1.983 |
| Rifampicin4 | 0.341 | 0.352 |
| Ethambutol3 | 0.392 | 1.577 |
| Meropenem3 | 3.656 | 2.259 |
| Vancomycin16 | 0.252 | 0.369 |
| Rv2680_day32 | -1.614 | -0.544 |
| H37Rv_KO_MarP | 0.481 | 0.141 |
| hypoxia_3wks | 0.315 | -0.279 |
| hypoxia_6wks | 0.165 | -0.766 |
| glycerol | 0.097 | -0.531 |
| cholesterol | 0.26 | -0.636 |
| AJ | 0.217 | -0.326 |
| Bibs02 | 0.587 | -0.184 |
| Bibs02c | 1.164 | -0.496 |
| BL6 | -0.582 | -0.681 |
| BL6a | 1.231 | -0.694 |
| BXD01 | -0.746 | -0.937 |
| BXD010 | 0.081 | -1.1 |
| BXD011 | -0.439 | -0.412 |
| BXD03 | -1.273 | -0.206 |
| BXD04 | -0.062 | -1.245 |
| BXD05 | 0.366 | -0.521 |
| BXD06 | -0.161 | -0.566 |
| BXD07 | -0.51 | -0.597 |
| BXD08 | -0.236 | -0.476 |
| BXD09 | -1.113 | -0.863 |
| CAST | 0.284 | -0.561 |
| CCcont | -0.355 | -1.183 |
| DS01 | 0.113 | -0.636 |
| DS02 | -0.109 | -0.343 |
| DS04 | -0.583 | -0.639 |
| DS0c | 0.534 | 0.075 |
| GP01 | 0.256 | -0.529 |
| GP02 | -0.75 | -0.224 |
| GP0c | -0.605 | -1.292 |
| NOD | -0.724 | 0.901 |
| NZO | 0.386 | -0.699 |
| PWK | 0.0 | -0.31 |
| H37Rv_KO_CtpC | -0.598 | -1.12 |
| H37Rv_KO_CtpD | -1.755 | -0.317 |
| H37Rv_KO_Rv1272 | -0.25 | -0.892 |
| H37Rv_KO_SugABC | -0.388 | 0.47 |
| H37Rv_KO_MbtN | -1.102 | -0.85 |
| Trans05 | 0.727 | -0.214 |
| macrophage_unactivated | -0.398 | -0.139 |
| IL1 | -0.531 | 0.249 |
| Rapamycin | 0.868 | -0.755 |
| Tcell | -0.16 | -0.44 |
| GMCSF | -0.401 | 0.354 |
| IFNab | -0.541 | -0.481 |
| IFNg | 0.249 | 0.112 |
| IFNg_GMCSF1 | 0.569 | 0.066 |
| Rv1432_day32 | -0.795 | 0.202 |
| Rv1565c_day32 | 0.057 | 0.137 |
| secA2_input | -0.258 | -0.966 |
| delta_Rv3594 | 0.843 | 0.467 |
| delta_Rv3717 | 0.161 | 0.712 |
| delta_Rv3811 | 0.642 | 0.143 |
| delta_Rv0954 | 0.39 | -0.624 |
| PonA1 | 0.38 | -0.512 |
| EccD1_KO | 0.352 | 0.053 |
| EspI_KO | -0.781 | 0.742 |
| PE35_KO | 0.236 | 0.563 |
| PPE68_KO | 0.0 | 0.528 |
| glycerol2 | -0.188 | -0.234 |
| lignocerate | 0.255 | -0.142 |
| oleate | 0.554 | 0.743 |
| phosphatidylcholine | 0.513 | -0.13 |
| acetate | -0.342 | -0.321 |
| glucAc | 0.895 | -0.509 |
| Rv0950ko | -0.362 | -0.151 |
| Rv1096ko | 0.492 | -0.513 |
| Rv3684ko | 0.095 | 0.275 |
| delta_otsA_trehalose | -0.468 | 0.0 |