Top 10 genes with highest correlation to Rv1598c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1776c/- | (cc=0.5725) | info on Rv1776c/- |
| Rv0844c/narL | (cc=0.5699) | info on Rv0844c/narL |
| Rv2545/vapB18 | (cc=0.5142) | info on Rv2545/vapB18 |
| Rv0131c/fadE1 | (cc=0.5109) | info on Rv0131c/fadE1 |
| Rv2071c/cobM | (cc=0.4988) | info on Rv2071c/cobM |
| Rv3628/ppa | (cc=0.4878) | info on Rv3628/ppa |
| Rv2548A/- | (cc=0.4811) | info on Rv2548A/- |
| Rv1871c/- | (cc=0.475) | info on Rv1871c/- |
| Rv1583c/- | (cc=0.4559) | info on Rv1583c/- |
| Rv3036c/TB22.2 | (cc=0.4446) | info on Rv3036c/TB22.2 |
Correlation of Rv1598c/- with Rv1871c/-
Normalized LFCs for Rv1598c/-:
(description and provenance of datasets)
| Rv1598c/- | Rv1871c/- | |
| Fe_supp_jason_reseq | -0.101 | -0.912 |
| low_pH_jason_reseq | -0.43 | -0.53 |
| NO_jason_reseq | -0.57 | 0.473 |
| B6_jason_reseq | -2.25 | -1.258 |
| MHCII_jason_reseq | -1.365 | -1.425 |
| Isoniazid02 | 0.898 | 1.439 |
| Rifampicin4 | 0.057 | 0.479 |
| Ethambutol3 | 0.026 | 0.428 |
| Meropenem3 | -0.277 | 0.461 |
| Vancomycin16 | 0.454 | 0.456 |
| Rv2680_day32 | 0.78 | -0.682 |
| H37Rv_KO_MarP | -0.257 | -0.285 |
| hypoxia_3wks | -0.658 | 0.75 |
| hypoxia_6wks | 0.752 | 0.073 |
| glycerol | 0.929 | -0.992 |
| cholesterol | 0.624 | -0.324 |
| AJ | -0.392 | -0.239 |
| Bibs02 | 0.156 | -0.36 |
| Bibs02c | -0.676 | -1.199 |
| BL6 | 1.5 | -0.055 |
| BL6a | -0.09 | -0.277 |
| BXD01 | 0.571 | -0.095 |
| BXD010 | 1.393 | 0.395 |
| BXD011 | 1.554 | 0.603 |
| BXD03 | 0.357 | -0.029 |
| BXD04 | -0.79 | -0.269 |
| BXD05 | 0.195 | 0.71 |
| BXD06 | 0.155 | 0.057 |
| BXD07 | 0.045 | 0.007 |
| BXD08 | 0.523 | 0.157 |
| BXD09 | -0.165 | -0.145 |
| CAST | 0.587 | 0.37 |
| CCcont | 0.61 | -0.471 |
| DS01 | 0.128 | -0.039 |
| DS02 | -0.703 | -0.501 |
| DS04 | 0.146 | -0.177 |
| DS0c | -0.453 | -0.277 |
| GP01 | 0.226 | 1.05 |
| GP02 | -1.152 | 0.11 |
| GP0c | 0.765 | 0.703 |
| NOD | -0.076 | 0.485 |
| NZO | -1.49 | -0.688 |
| PWK | -0.547 | -0.604 |
| H37Rv_KO_CtpC | -0.171 | 0.112 |
| H37Rv_KO_CtpD | 1.076 | 0.495 |
| H37Rv_KO_Rv1272 | 1.206 | 0.893 |
| H37Rv_KO_SugABC | 0.894 | 0.349 |
| H37Rv_KO_MbtN | 1.943 | 1.584 |
| Trans05 | 1.179 | 0.698 |
| macrophage_unactivated | 0.249 | 0.625 |
| IL1 | 0.068 | -0.403 |
| Rapamycin | -0.611 | 0.476 |
| Tcell | -0.114 | -0.345 |
| GMCSF | 0.121 | 0.869 |
| IFNab | -0.142 | 0.686 |
| IFNg | -0.428 | -0.168 |
| IFNg_GMCSF1 | -0.148 | 0.292 |
| Rv1432_day32 | 0.566 | -0.485 |
| Rv1565c_day32 | 0.163 | -0.009 |
| secA2_input | 1.295 | -0.994 |
| delta_Rv3594 | -1.872 | -1.137 |
| delta_Rv3717 | -0.799 | -1.158 |
| delta_Rv3811 | -1.224 | -0.758 |
| delta_Rv0954 | -1.976 | -0.908 |
| PonA1 | -0.998 | -1.138 |
| EccD1_KO | 0.043 | -0.306 |
| EspI_KO | 1.146 | 0.915 |
| PE35_KO | 1.4 | -0.184 |
| PPE68_KO | 0.669 | -0.074 |
| glycerol2 | 0.07 | 0.265 |
| lignocerate | 0.36 | -0.578 |
| oleate | 0.449 | 0.698 |
| phosphatidylcholine | 0.265 | 0.37 |
| acetate | 0.424 | -0.836 |
| glucAc | -0.403 | -1.325 |
| Rv0950ko | 0.531 | -0.874 |
| Rv1096ko | 0.0 | -1.378 |
| Rv3684ko | -0.072 | -0.707 |
| delta_otsA_trehalose | -1.62 | 0.11 |