Top 10 genes with highest correlation to Rv1593c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3421c/- | (cc=0.6084) | info on Rv3421c/- |
| Rv3419c/gcp | (cc=0.5944) | info on Rv3419c/gcp |
| Rv1239c/corA | (cc=0.5772) | info on Rv1239c/corA |
| Rv1100/- | (cc=0.5452) | info on Rv1100/- |
| Rv3429/PPE59 | (cc=0.5437) | info on Rv3429/PPE59 |
| Rv0047c/- | (cc=0.5341) | info on Rv0047c/- |
| Rv0823c/- | (cc=0.534) | info on Rv0823c/- |
| Rv0114/gmhB | (cc=0.5324) | info on Rv0114/gmhB |
| Rv3567c/hsaB | (cc=0.5162) | info on Rv3567c/hsaB |
| Rv2427c/proA | (cc=0.5155) | info on Rv2427c/proA |
Correlation of Rv1593c/- with Rv3419c/gcp
Normalized LFCs for Rv1593c/-:
(description and provenance of datasets)
| Rv1593c/- | Rv3419c/gcp | |
| Fe_supp_jason_reseq | 0.043 | -1.455 |
| low_pH_jason_reseq | 0.557 | 0.353 |
| NO_jason_reseq | 0.617 | 3.179 |
| B6_jason_reseq | 0.295 | 0.578 |
| MHCII_jason_reseq | -0.537 | -1.332 |
| Isoniazid02 | 0.0 | -1.685 |
| Rifampicin4 | 0.831 | 0.845 |
| Ethambutol3 | 1.021 | 1.389 |
| Meropenem3 | 1.105 | 0.0 |
| Vancomycin16 | 0.337 | 0.13 |
| Rv2680_day32 | -1.759 | -0.811 |
| H37Rv_KO_MarP | 0.69 | -0.44 |
| hypoxia_3wks | -1.192 | 0.0 |
| hypoxia_6wks | -0.679 | 0.0 |
| glycerol | -1.172 | -0.083 |
| cholesterol | -1.525 | -1.447 |
| AJ | -0.568 | 1.536 |
| Bibs02 | -1.004 | -0.703 |
| Bibs02c | -1.316 | -0.467 |
| BL6 | 1.101 | 2.916 |
| BL6a | 0.436 | 1.474 |
| BXD01 | 0.931 | 2.919 |
| BXD010 | 1.191 | 2.677 |
| BXD011 | 2.726 | 3.476 |
| BXD03 | 0.917 | 3.152 |
| BXD04 | 1.905 | 3.199 |
| BXD05 | 1.211 | 2.698 |
| BXD06 | 1.143 | 3.834 |
| BXD07 | 1.219 | 2.848 |
| BXD08 | 1.04 | 3.06 |
| BXD09 | 0.863 | 2.295 |
| CAST | 1.391 | 2.279 |
| CCcont | 0.486 | 2.265 |
| DS01 | -0.775 | -0.775 |
| DS02 | 0.479 | -0.181 |
| DS04 | 0.656 | 0.873 |
| DS0c | 0.152 | -0.278 |
| GP01 | 0.496 | -0.888 |
| GP02 | -0.383 | -0.831 |
| GP0c | 0.379 | 0.775 |
| NOD | -0.213 | 1.01 |
| NZO | 0.497 | 1.777 |
| PWK | 1.175 | 3.711 |
| H37Rv_KO_CtpC | 0.155 | 1.272 |
| H37Rv_KO_CtpD | 1.596 | 2.089 |
| H37Rv_KO_Rv1272 | -0.394 | 0.993 |
| H37Rv_KO_SugABC | 0.817 | 1.521 |
| H37Rv_KO_MbtN | -0.855 | 1.977 |
| Trans05 | 0.451 | 1.517 |
| macrophage_unactivated | -1.139 | -1.045 |
| IL1 | -0.392 | -0.715 |
| Rapamycin | -0.187 | -1.795 |
| Tcell | 0.433 | 0.349 |
| GMCSF | -0.124 | -1.127 |
| IFNab | -1.116 | 0.813 |
| IFNg | 0.139 | -1.141 |
| IFNg_GMCSF1 | -0.063 | -1.191 |
| Rv1432_day32 | -0.669 | -0.395 |
| Rv1565c_day32 | -2.267 | -0.262 |
| secA2_input | -0.808 | -0.163 |
| delta_Rv3594 | 0.266 | 0.598 |
| delta_Rv3717 | 0.03 | 0.992 |
| delta_Rv3811 | -0.898 | 0.949 |
| delta_Rv0954 | 0.463 | -0.774 |
| PonA1 | 0.214 | 0.121 |
| EccD1_KO | -0.497 | 0.368 |
| EspI_KO | -0.545 | -1.229 |
| PE35_KO | -0.327 | -0.353 |
| PPE68_KO | -0.154 | -0.307 |
| glycerol2 | -0.598 | -1.808 |
| lignocerate | 0.477 | -1.93 |
| oleate | -0.658 | -1.829 |
| phosphatidylcholine | 0.43 | -2.043 |
| acetate | 0.547 | -1.453 |
| glucAc | 0.37 | 1.045 |
| Rv0950ko | 1.052 | 0.419 |
| Rv1096ko | 0.82 | -0.259 |
| Rv3684ko | 0.891 | 1.15 |
| delta_otsA_trehalose | 0.081 | 0.965 |