Top 10 genes with highest correlation to Rv1593c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3421c/- | (cc=0.6084) | info on Rv3421c/- |
| Rv3419c/gcp | (cc=0.5944) | info on Rv3419c/gcp |
| Rv1239c/corA | (cc=0.5772) | info on Rv1239c/corA |
| Rv1100/- | (cc=0.5452) | info on Rv1100/- |
| Rv3429/PPE59 | (cc=0.5437) | info on Rv3429/PPE59 |
| Rv0047c/- | (cc=0.5341) | info on Rv0047c/- |
| Rv0823c/- | (cc=0.534) | info on Rv0823c/- |
| Rv0114/gmhB | (cc=0.5324) | info on Rv0114/gmhB |
| Rv3567c/hsaB | (cc=0.5162) | info on Rv3567c/hsaB |
| Rv2427c/proA | (cc=0.5155) | info on Rv2427c/proA |
Correlation of Rv1593c/- with Rv1239c/corA
Normalized LFCs for Rv1593c/-:
(description and provenance of datasets)
| Rv1593c/- | Rv1239c/corA | |
| Fe_supp_jason_reseq | 0.043 | -0.69 |
| low_pH_jason_reseq | 0.557 | 1.064 |
| NO_jason_reseq | 0.617 | 1.433 |
| B6_jason_reseq | 0.295 | 0.087 |
| MHCII_jason_reseq | -0.537 | -1.266 |
| Isoniazid02 | 0.0 | 0.036 |
| Rifampicin4 | 0.831 | -0.625 |
| Ethambutol3 | 1.021 | 0.0 |
| Meropenem3 | 1.105 | -1.067 |
| Vancomycin16 | 0.337 | -0.459 |
| Rv2680_day32 | -1.759 | 0.318 |
| H37Rv_KO_MarP | 0.69 | 0.505 |
| hypoxia_3wks | -1.192 | -2.117 |
| hypoxia_6wks | -0.679 | 0.848 |
| glycerol | -1.172 | 0.984 |
| cholesterol | -1.525 | 0.04 |
| AJ | -0.568 | 1.869 |
| Bibs02 | -1.004 | -0.338 |
| Bibs02c | -1.316 | -0.69 |
| BL6 | 1.101 | 1.43 |
| BL6a | 0.436 | 2.099 |
| BXD01 | 0.931 | 2.917 |
| BXD010 | 1.191 | 2.38 |
| BXD011 | 2.726 | 3.779 |
| BXD03 | 0.917 | 2.051 |
| BXD04 | 1.905 | 3.404 |
| BXD05 | 1.211 | 2.764 |
| BXD06 | 1.143 | 3.273 |
| BXD07 | 1.219 | 2.452 |
| BXD08 | 1.04 | 3.451 |
| BXD09 | 0.863 | 2.319 |
| CAST | 1.391 | 3.712 |
| CCcont | 0.486 | 0.288 |
| DS01 | -0.775 | -0.732 |
| DS02 | 0.479 | -1.182 |
| DS04 | 0.656 | 0.132 |
| DS0c | 0.152 | -0.757 |
| GP01 | 0.496 | -0.288 |
| GP02 | -0.383 | 0.034 |
| GP0c | 0.379 | 0.251 |
| NOD | -0.213 | 1.23 |
| NZO | 0.497 | 2.164 |
| PWK | 1.175 | 4.489 |
| H37Rv_KO_CtpC | 0.155 | 0.494 |
| H37Rv_KO_CtpD | 1.596 | 1.213 |
| H37Rv_KO_Rv1272 | -0.394 | 1.06 |
| H37Rv_KO_SugABC | 0.817 | 1.269 |
| H37Rv_KO_MbtN | -0.855 | 0.732 |
| Trans05 | 0.451 | 1.737 |
| macrophage_unactivated | -1.139 | -2.257 |
| IL1 | -0.392 | -1.0 |
| Rapamycin | -0.187 | -2.427 |
| Tcell | 0.433 | 0.596 |
| GMCSF | -0.124 | -0.694 |
| IFNab | -1.116 | -2.013 |
| IFNg | 0.139 | -1.505 |
| IFNg_GMCSF1 | -0.063 | -2.017 |
| Rv1432_day32 | -0.669 | 0.731 |
| Rv1565c_day32 | -2.267 | -1.311 |
| secA2_input | -0.808 | -0.377 |
| delta_Rv3594 | 0.266 | -0.234 |
| delta_Rv3717 | 0.03 | 0.766 |
| delta_Rv3811 | -0.898 | -1.084 |
| delta_Rv0954 | 0.463 | -0.596 |
| PonA1 | 0.214 | 0.792 |
| EccD1_KO | -0.497 | -0.72 |
| EspI_KO | -0.545 | -0.941 |
| PE35_KO | -0.327 | -0.998 |
| PPE68_KO | -0.154 | -0.893 |
| glycerol2 | -0.598 | -1.449 |
| lignocerate | 0.477 | -2.954 |
| oleate | -0.658 | -2.884 |
| phosphatidylcholine | 0.43 | -2.578 |
| acetate | 0.547 | -0.785 |
| glucAc | 0.37 | -1.674 |
| Rv0950ko | 1.052 | 1.447 |
| Rv1096ko | 0.82 | 0.072 |
| Rv3684ko | 0.891 | 1.601 |
| delta_otsA_trehalose | 0.081 | 0.147 |