Top 10 genes with highest correlation to Rv1593c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3421c/- | (cc=0.6084) | info on Rv3421c/- |
| Rv3419c/gcp | (cc=0.5944) | info on Rv3419c/gcp |
| Rv1239c/corA | (cc=0.5772) | info on Rv1239c/corA |
| Rv1100/- | (cc=0.5452) | info on Rv1100/- |
| Rv3429/PPE59 | (cc=0.5437) | info on Rv3429/PPE59 |
| Rv0047c/- | (cc=0.5341) | info on Rv0047c/- |
| Rv0823c/- | (cc=0.534) | info on Rv0823c/- |
| Rv0114/gmhB | (cc=0.5324) | info on Rv0114/gmhB |
| Rv3567c/hsaB | (cc=0.5162) | info on Rv3567c/hsaB |
| Rv2427c/proA | (cc=0.5155) | info on Rv2427c/proA |
Correlation of Rv1593c/- with Rv2427c/proA
Normalized LFCs for Rv1593c/-:
(description and provenance of datasets)
| Rv1593c/- | Rv2427c/proA | |
| Fe_supp_jason_reseq | 0.043 | 0.808 |
| low_pH_jason_reseq | 0.557 | 2.888 |
| NO_jason_reseq | 0.617 | 0.614 |
| B6_jason_reseq | 0.295 | -1.807 |
| MHCII_jason_reseq | -0.537 | -2.131 |
| Isoniazid02 | 0.0 | 0.0 |
| Rifampicin4 | 0.831 | 1.056 |
| Ethambutol3 | 1.021 | 1.186 |
| Meropenem3 | 1.105 | 1.313 |
| Vancomycin16 | 0.337 | -0.568 |
| Rv2680_day32 | -1.759 | -0.32 |
| H37Rv_KO_MarP | 0.69 | 1.349 |
| hypoxia_3wks | -1.192 | -3.353 |
| hypoxia_6wks | -0.679 | -1.516 |
| glycerol | -1.172 | -0.566 |
| cholesterol | -1.525 | -0.091 |
| AJ | -0.568 | -0.56 |
| Bibs02 | -1.004 | -1.695 |
| Bibs02c | -1.316 | -1.79 |
| BL6 | 1.101 | 0.337 |
| BL6a | 0.436 | 0.284 |
| BXD01 | 0.931 | 0.727 |
| BXD010 | 1.191 | 0.691 |
| BXD011 | 2.726 | 0.566 |
| BXD03 | 0.917 | 0.396 |
| BXD04 | 1.905 | 0.622 |
| BXD05 | 1.211 | 0.394 |
| BXD06 | 1.143 | 0.422 |
| BXD07 | 1.219 | 1.003 |
| BXD08 | 1.04 | 0.389 |
| BXD09 | 0.863 | 0.596 |
| CAST | 1.391 | 0.33 |
| CCcont | 0.486 | 1.214 |
| DS01 | -0.775 | -2.572 |
| DS02 | 0.479 | -2.368 |
| DS04 | 0.656 | -0.468 |
| DS0c | 0.152 | -2.011 |
| GP01 | 0.496 | 0.193 |
| GP02 | -0.383 | 0.369 |
| GP0c | 0.379 | 0.35 |
| NOD | -0.213 | -0.542 |
| NZO | 0.497 | 0.63 |
| PWK | 1.175 | 0.227 |
| H37Rv_KO_CtpC | 0.155 | 0.399 |
| H37Rv_KO_CtpD | 1.596 | -0.257 |
| H37Rv_KO_Rv1272 | -0.394 | 0.681 |
| H37Rv_KO_SugABC | 0.817 | 1.678 |
| H37Rv_KO_MbtN | -0.855 | 1.402 |
| Trans05 | 0.451 | 0.187 |
| macrophage_unactivated | -1.139 | -1.111 |
| IL1 | -0.392 | 0.208 |
| Rapamycin | -0.187 | -1.476 |
| Tcell | 0.433 | 0.987 |
| GMCSF | -0.124 | -1.011 |
| IFNab | -1.116 | -1.064 |
| IFNg | 0.139 | -0.551 |
| IFNg_GMCSF1 | -0.063 | -0.735 |
| Rv1432_day32 | -0.669 | -0.034 |
| Rv1565c_day32 | -2.267 | -1.75 |
| secA2_input | -0.808 | 0.135 |
| delta_Rv3594 | 0.266 | 0.096 |
| delta_Rv3717 | 0.03 | 1.022 |
| delta_Rv3811 | -0.898 | -0.623 |
| delta_Rv0954 | 0.463 | -1.928 |
| PonA1 | 0.214 | 0.403 |
| EccD1_KO | -0.497 | -0.5 |
| EspI_KO | -0.545 | -0.75 |
| PE35_KO | -0.327 | -0.601 |
| PPE68_KO | -0.154 | -1.126 |
| glycerol2 | -0.598 | -1.61 |
| lignocerate | 0.477 | -0.933 |
| oleate | -0.658 | -1.541 |
| phosphatidylcholine | 0.43 | -1.441 |
| acetate | 0.547 | 0.655 |
| glucAc | 0.37 | 0.555 |
| Rv0950ko | 1.052 | 1.52 |
| Rv1096ko | 0.82 | 1.797 |
| Rv3684ko | 0.891 | 1.88 |
| delta_otsA_trehalose | 0.081 | 2.25 |