Top 10 genes with highest correlation to Rv1553/frdB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1970/lprM | (cc=0.4996) | info on Rv1970/lprM |
| Rv1148c/- | (cc=0.44) | info on Rv1148c/- |
| Rv0724A/- | (cc=0.4359) | info on Rv0724A/- |
| Rv1036c/- | (cc=0.4079) | info on Rv1036c/- |
| Rv3093c/- | (cc=0.405) | info on Rv3093c/- |
| Rv1916/aceAb | (cc=0.4048) | info on Rv1916/aceAb |
| Rv0837c/- | (cc=0.4035) | info on Rv0837c/- |
| Rv2436/rbsK | (cc=0.3938) | info on Rv2436/rbsK |
| Rv1902c/nanT | (cc=0.3909) | info on Rv1902c/nanT |
| Rv1733c/- | (cc=0.3877) | info on Rv1733c/- |
Correlation of Rv1553/frdB with Rv1902c/nanT
Normalized LFCs for Rv1553/frdB:
(description and provenance of datasets)
| Rv1553/frdB | Rv1902c/nanT | |
| Fe_supp_jason_reseq | -1.187 | 0.36 |
| low_pH_jason_reseq | -0.674 | -0.361 |
| NO_jason_reseq | -0.32 | 0.41 |
| B6_jason_reseq | 0.0 | -0.02 |
| MHCII_jason_reseq | 0.022 | 0.453 |
| Isoniazid02 | -0.842 | 0.25 |
| Rifampicin4 | -0.176 | 0.241 |
| Ethambutol3 | -0.642 | 0.195 |
| Meropenem3 | -0.398 | 0.074 |
| Vancomycin16 | -0.565 | -0.133 |
| Rv2680_day32 | 0.909 | 0.039 |
| H37Rv_KO_MarP | -0.126 | -0.143 |
| hypoxia_3wks | 0.072 | -0.04 |
| hypoxia_6wks | -0.998 | 0.079 |
| glycerol | -0.142 | -0.161 |
| cholesterol | 0.069 | 0.442 |
| AJ | -0.118 | -0.069 |
| Bibs02 | 0.212 | -0.266 |
| Bibs02c | 1.369 | -0.024 |
| BL6 | -1.257 | -0.383 |
| BL6a | 0.011 | -0.197 |
| BXD01 | -0.334 | -0.039 |
| BXD010 | 0.069 | -0.476 |
| BXD011 | -0.114 | 0.265 |
| BXD03 | -0.435 | 0.085 |
| BXD04 | 1.278 | 0.164 |
| BXD05 | 0.057 | 0.241 |
| BXD06 | 0.102 | -0.132 |
| BXD07 | -0.48 | -0.128 |
| BXD08 | 0.485 | -0.132 |
| BXD09 | -0.254 | -0.355 |
| CAST | -0.302 | 0.0 |
| CCcont | -0.797 | 0.0 |
| DS01 | -0.643 | 0.055 |
| DS02 | -0.441 | -0.347 |
| DS04 | 0.831 | 0.022 |
| DS0c | 0.288 | -0.3 |
| GP01 | -0.668 | 0.368 |
| GP02 | -0.133 | 0.124 |
| GP0c | -1.167 | -0.441 |
| NOD | -0.838 | -0.452 |
| NZO | -0.049 | -0.402 |
| PWK | -0.384 | 0.08 |
| H37Rv_KO_CtpC | 0.453 | 0.181 |
| H37Rv_KO_CtpD | 0.531 | -0.184 |
| H37Rv_KO_Rv1272 | 0.766 | 0.988 |
| H37Rv_KO_SugABC | 0.738 | 0.852 |
| H37Rv_KO_MbtN | -0.039 | -0.178 |
| Trans05 | 0.762 | 1.209 |
| macrophage_unactivated | -0.082 | -0.29 |
| IL1 | -0.392 | -0.991 |
| Rapamycin | -0.491 | -0.694 |
| Tcell | -0.042 | -0.587 |
| GMCSF | 0.499 | -0.536 |
| IFNab | 0.296 | -0.789 |
| IFNg | -0.826 | -0.481 |
| IFNg_GMCSF1 | 0.666 | -0.031 |
| Rv1432_day32 | -0.465 | 0.361 |
| Rv1565c_day32 | 0.106 | -0.133 |
| secA2_input | -0.538 | -0.042 |
| delta_Rv3594 | 0.967 | 1.184 |
| delta_Rv3717 | 1.146 | 0.381 |
| delta_Rv3811 | 0.461 | 0.561 |
| delta_Rv0954 | 0.956 | 0.329 |
| PonA1 | 0.384 | 0.796 |
| EccD1_KO | 0.388 | 0.516 |
| EspI_KO | 0.847 | 0.399 |
| PE35_KO | 0.89 | 0.053 |
| PPE68_KO | 0.928 | 0.394 |
| glycerol2 | 0.283 | 0.345 |
| lignocerate | 0.079 | 0.312 |
| oleate | 0.771 | 0.527 |
| phosphatidylcholine | 0.65 | 0.396 |
| acetate | 0.376 | 0.264 |
| glucAc | -0.35 | 0.079 |
| Rv0950ko | 0.208 | 0.416 |
| Rv1096ko | -0.419 | -0.235 |
| Rv3684ko | -0.21 | -0.255 |
| delta_otsA_trehalose | 0.137 | 1.293 |