Top 10 genes with highest correlation to Rv1553/frdB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1970/lprM | (cc=0.4996) | info on Rv1970/lprM |
| Rv1148c/- | (cc=0.44) | info on Rv1148c/- |
| Rv0724A/- | (cc=0.4359) | info on Rv0724A/- |
| Rv1036c/- | (cc=0.4079) | info on Rv1036c/- |
| Rv3093c/- | (cc=0.405) | info on Rv3093c/- |
| Rv1916/aceAb | (cc=0.4048) | info on Rv1916/aceAb |
| Rv0837c/- | (cc=0.4035) | info on Rv0837c/- |
| Rv2436/rbsK | (cc=0.3938) | info on Rv2436/rbsK |
| Rv1902c/nanT | (cc=0.3909) | info on Rv1902c/nanT |
| Rv1733c/- | (cc=0.3877) | info on Rv1733c/- |
Correlation of Rv1553/frdB with Rv1733c/-
Normalized LFCs for Rv1553/frdB:
(description and provenance of datasets)
| Rv1553/frdB | Rv1733c/- | |
| Fe_supp_jason_reseq | -1.187 | -4.963 |
| low_pH_jason_reseq | -0.674 | -2.784 |
| NO_jason_reseq | -0.32 | -0.609 |
| B6_jason_reseq | 0.0 | 0.128 |
| MHCII_jason_reseq | 0.022 | -0.017 |
| Isoniazid02 | -0.842 | -0.32 |
| Rifampicin4 | -0.176 | 0.162 |
| Ethambutol3 | -0.642 | 0.089 |
| Meropenem3 | -0.398 | 0.298 |
| Vancomycin16 | -0.565 | -0.358 |
| Rv2680_day32 | 0.909 | -0.435 |
| H37Rv_KO_MarP | -0.126 | -0.763 |
| hypoxia_3wks | 0.072 | -1.463 |
| hypoxia_6wks | -0.998 | -3.55 |
| glycerol | -0.142 | -2.017 |
| cholesterol | 0.069 | -0.435 |
| AJ | -0.118 | 0.212 |
| Bibs02 | 0.212 | -0.988 |
| Bibs02c | 1.369 | 0.726 |
| BL6 | -1.257 | -1.864 |
| BL6a | 0.011 | -0.346 |
| BXD01 | -0.334 | -1.445 |
| BXD010 | 0.069 | -0.026 |
| BXD011 | -0.114 | -1.747 |
| BXD03 | -0.435 | -1.781 |
| BXD04 | 1.278 | -2.163 |
| BXD05 | 0.057 | -1.821 |
| BXD06 | 0.102 | -1.688 |
| BXD07 | -0.48 | -1.347 |
| BXD08 | 0.485 | -2.327 |
| BXD09 | -0.254 | -1.046 |
| CAST | -0.302 | 0.167 |
| CCcont | -0.797 | -2.921 |
| DS01 | -0.643 | -0.236 |
| DS02 | -0.441 | -1.407 |
| DS04 | 0.831 | -0.877 |
| DS0c | 0.288 | 0.137 |
| GP01 | -0.668 | -2.033 |
| GP02 | -0.133 | -1.915 |
| GP0c | -1.167 | -0.258 |
| NOD | -0.838 | 2.128 |
| NZO | -0.049 | 1.508 |
| PWK | -0.384 | -0.274 |
| H37Rv_KO_CtpC | 0.453 | -2.354 |
| H37Rv_KO_CtpD | 0.531 | 0.974 |
| H37Rv_KO_Rv1272 | 0.766 | -1.934 |
| H37Rv_KO_SugABC | 0.738 | -1.97 |
| H37Rv_KO_MbtN | -0.039 | -1.803 |
| Trans05 | 0.762 | -2.645 |
| macrophage_unactivated | -0.082 | -1.291 |
| IL1 | -0.392 | 0.053 |
| Rapamycin | -0.491 | -3.716 |
| Tcell | -0.042 | -1.652 |
| GMCSF | 0.499 | -0.557 |
| IFNab | 0.296 | -0.828 |
| IFNg | -0.826 | -0.909 |
| IFNg_GMCSF1 | 0.666 | -0.927 |
| Rv1432_day32 | -0.465 | 0.343 |
| Rv1565c_day32 | 0.106 | -1.355 |
| secA2_input | -0.538 | 0.776 |
| delta_Rv3594 | 0.967 | 2.899 |
| delta_Rv3717 | 1.146 | 2.64 |
| delta_Rv3811 | 0.461 | 2.528 |
| delta_Rv0954 | 0.956 | 1.203 |
| PonA1 | 0.384 | -1.937 |
| EccD1_KO | 0.388 | 0.661 |
| EspI_KO | 0.847 | 2.33 |
| PE35_KO | 0.89 | 1.89 |
| PPE68_KO | 0.928 | 2.288 |
| glycerol2 | 0.283 | 1.16 |
| lignocerate | 0.079 | -0.604 |
| oleate | 0.771 | 2.025 |
| phosphatidylcholine | 0.65 | 0.487 |
| acetate | 0.376 | -1.736 |
| glucAc | -0.35 | -3.147 |
| Rv0950ko | 0.208 | 0.0 |
| Rv1096ko | -0.419 | -0.826 |
| Rv3684ko | -0.21 | -3.098 |
| delta_otsA_trehalose | 0.137 | -0.625 |