Top 10 genes with highest correlation to Rv1553/frdB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1970/lprM | (cc=0.4996) | info on Rv1970/lprM |
| Rv1148c/- | (cc=0.44) | info on Rv1148c/- |
| Rv0724A/- | (cc=0.4359) | info on Rv0724A/- |
| Rv1036c/- | (cc=0.4079) | info on Rv1036c/- |
| Rv3093c/- | (cc=0.405) | info on Rv3093c/- |
| Rv1916/aceAb | (cc=0.4048) | info on Rv1916/aceAb |
| Rv0837c/- | (cc=0.4035) | info on Rv0837c/- |
| Rv2436/rbsK | (cc=0.3938) | info on Rv2436/rbsK |
| Rv1902c/nanT | (cc=0.3909) | info on Rv1902c/nanT |
| Rv1733c/- | (cc=0.3877) | info on Rv1733c/- |
Correlation of Rv1553/frdB with Rv0837c/-
Normalized LFCs for Rv1553/frdB:
(description and provenance of datasets)
| Rv1553/frdB | Rv0837c/- | |
| Fe_supp_jason_reseq | -1.187 | 0.036 |
| low_pH_jason_reseq | -0.674 | -0.402 |
| NO_jason_reseq | -0.32 | 0.541 |
| B6_jason_reseq | 0.0 | -0.36 |
| MHCII_jason_reseq | 0.022 | 0.768 |
| Isoniazid02 | -0.842 | -0.528 |
| Rifampicin4 | -0.176 | 0.236 |
| Ethambutol3 | -0.642 | -0.373 |
| Meropenem3 | -0.398 | -0.543 |
| Vancomycin16 | -0.565 | -0.294 |
| Rv2680_day32 | 0.909 | -0.159 |
| H37Rv_KO_MarP | -0.126 | 0.394 |
| hypoxia_3wks | 0.072 | 0.124 |
| hypoxia_6wks | -0.998 | -0.017 |
| glycerol | -0.142 | -0.489 |
| cholesterol | 0.069 | -0.562 |
| AJ | -0.118 | -0.313 |
| Bibs02 | 0.212 | 0.24 |
| Bibs02c | 1.369 | 0.029 |
| BL6 | -1.257 | -0.31 |
| BL6a | 0.011 | -0.044 |
| BXD01 | -0.334 | -0.81 |
| BXD010 | 0.069 | -0.362 |
| BXD011 | -0.114 | -0.503 |
| BXD03 | -0.435 | -0.703 |
| BXD04 | 1.278 | -0.039 |
| BXD05 | 0.057 | -0.496 |
| BXD06 | 0.102 | -0.451 |
| BXD07 | -0.48 | -0.556 |
| BXD08 | 0.485 | -0.242 |
| BXD09 | -0.254 | -0.465 |
| CAST | -0.302 | -0.557 |
| CCcont | -0.797 | -0.799 |
| DS01 | -0.643 | -0.075 |
| DS02 | -0.441 | -0.184 |
| DS04 | 0.831 | 1.006 |
| DS0c | 0.288 | -0.049 |
| GP01 | -0.668 | -0.41 |
| GP02 | -0.133 | -1.107 |
| GP0c | -1.167 | -0.942 |
| NOD | -0.838 | -0.083 |
| NZO | -0.049 | -0.159 |
| PWK | -0.384 | -0.567 |
| H37Rv_KO_CtpC | 0.453 | -0.193 |
| H37Rv_KO_CtpD | 0.531 | 0.115 |
| H37Rv_KO_Rv1272 | 0.766 | -0.19 |
| H37Rv_KO_SugABC | 0.738 | 0.835 |
| H37Rv_KO_MbtN | -0.039 | -0.014 |
| Trans05 | 0.762 | 0.129 |
| macrophage_unactivated | -0.082 | -0.331 |
| IL1 | -0.392 | -0.62 |
| Rapamycin | -0.491 | -0.509 |
| Tcell | -0.042 | -0.785 |
| GMCSF | 0.499 | -0.227 |
| IFNab | 0.296 | -0.632 |
| IFNg | -0.826 | -0.024 |
| IFNg_GMCSF1 | 0.666 | -0.588 |
| Rv1432_day32 | -0.465 | -0.416 |
| Rv1565c_day32 | 0.106 | -0.205 |
| secA2_input | -0.538 | -0.366 |
| delta_Rv3594 | 0.967 | 1.345 |
| delta_Rv3717 | 1.146 | 0.931 |
| delta_Rv3811 | 0.461 | 0.642 |
| delta_Rv0954 | 0.956 | 1.018 |
| PonA1 | 0.384 | 0.665 |
| EccD1_KO | 0.388 | 0.089 |
| EspI_KO | 0.847 | 0.302 |
| PE35_KO | 0.89 | 0.105 |
| PPE68_KO | 0.928 | 0.115 |
| glycerol2 | 0.283 | -0.105 |
| lignocerate | 0.079 | -0.566 |
| oleate | 0.771 | 0.329 |
| phosphatidylcholine | 0.65 | 0.022 |
| acetate | 0.376 | -0.459 |
| glucAc | -0.35 | -0.952 |
| Rv0950ko | 0.208 | 0.778 |
| Rv1096ko | -0.419 | 1.176 |
| Rv3684ko | -0.21 | 1.539 |
| delta_otsA_trehalose | 0.137 | -1.228 |