Top 10 genes with highest correlation to Rv1528c/papA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2478c/- | (cc=0.555) | info on Rv2478c/- |
| Rv1516c/- | (cc=0.5471) | info on Rv1516c/- |
| Rv0828c/- | (cc=0.4906) | info on Rv0828c/- |
| Rv1542c/glbN | (cc=0.4853) | info on Rv1542c/glbN |
| Rv0388c/PPE9 | (cc=0.4808) | info on Rv0388c/PPE9 |
| Rv1453/- | (cc=0.4547) | info on Rv1453/- |
| Rv2331/- | (cc=0.442) | info on Rv2331/- |
| Rv3103c/- | (cc=0.4399) | info on Rv3103c/- |
| Rv3368c/- | (cc=0.436) | info on Rv3368c/- |
| Rv0141c/- | (cc=0.4268) | info on Rv0141c/- |
Correlation of Rv1528c/papA4 with Rv3103c/-
Normalized LFCs for Rv1528c/papA4:
(description and provenance of datasets)
| Rv1528c/papA4 | Rv3103c/- | |
| Fe_supp_jason_reseq | -1.628 | 0.3 |
| low_pH_jason_reseq | -0.105 | 0.412 |
| NO_jason_reseq | -0.73 | 0.184 |
| B6_jason_reseq | 0.215 | 0.772 |
| MHCII_jason_reseq | 1.047 | 0.842 |
| Isoniazid02 | 0.511 | 0.566 |
| Rifampicin4 | -0.341 | -0.206 |
| Ethambutol3 | 0.743 | -0.3 |
| Meropenem3 | 0.67 | 0.962 |
| Vancomycin16 | 0.308 | -0.011 |
| Rv2680_day32 | -1.157 | -0.525 |
| H37Rv_KO_MarP | -0.332 | 0.188 |
| hypoxia_3wks | -0.064 | 1.025 |
| hypoxia_6wks | -0.441 | 0.848 |
| glycerol | 0.366 | -0.2 |
| cholesterol | -0.374 | 0.648 |
| AJ | 0.526 | -0.38 |
| Bibs02 | 1.032 | -0.142 |
| Bibs02c | 0.038 | 0.684 |
| BL6 | -0.945 | -0.799 |
| BL6a | 0.489 | 0.245 |
| BXD01 | -0.135 | -0.309 |
| BXD010 | -1.142 | -0.193 |
| BXD011 | 0.387 | 0.311 |
| BXD03 | 0.058 | 0.057 |
| BXD04 | 0.733 | -0.39 |
| BXD05 | -0.206 | -0.271 |
| BXD06 | 0.214 | -0.246 |
| BXD07 | -0.436 | -0.177 |
| BXD08 | 0.119 | -0.296 |
| BXD09 | 0.164 | -0.212 |
| CAST | 0.953 | 0.472 |
| CCcont | -0.772 | -1.069 |
| DS01 | 0.695 | 0.66 |
| DS02 | -0.317 | 0.367 |
| DS04 | 1.476 | 0.547 |
| DS0c | 1.07 | -0.025 |
| GP01 | -2.152 | -1.468 |
| GP02 | -1.947 | -2.064 |
| GP0c | -2.492 | -2.029 |
| NOD | 0.937 | 0.748 |
| NZO | 0.587 | 0.105 |
| PWK | 0.685 | -0.472 |
| H37Rv_KO_CtpC | -0.191 | -0.228 |
| H37Rv_KO_CtpD | 0.853 | 0.872 |
| H37Rv_KO_Rv1272 | 0.89 | 0.522 |
| H37Rv_KO_SugABC | 0.401 | -1.29 |
| H37Rv_KO_MbtN | 0.925 | 0.189 |
| Trans05 | -0.347 | 0.604 |
| macrophage_unactivated | -0.732 | -0.294 |
| IL1 | -0.409 | -0.498 |
| Rapamycin | -0.396 | -0.101 |
| Tcell | -0.055 | -0.955 |
| GMCSF | 0.108 | 0.879 |
| IFNab | 0.193 | -0.372 |
| IFNg | -0.158 | 0.043 |
| IFNg_GMCSF1 | 0.079 | -0.264 |
| Rv1432_day32 | 0.0 | 1.173 |
| Rv1565c_day32 | 0.602 | -1.554 |
| secA2_input | 0.643 | 1.59 |
| delta_Rv3594 | -0.249 | -0.476 |
| delta_Rv3717 | -1.073 | 0.299 |
| delta_Rv3811 | -0.968 | -0.486 |
| delta_Rv0954 | -0.261 | -0.41 |
| PonA1 | -0.452 | 0.478 |
| EccD1_KO | -0.605 | -0.562 |
| EspI_KO | -0.724 | 0.465 |
| PE35_KO | 0.149 | -0.438 |
| PPE68_KO | -0.528 | -1.014 |
| glycerol2 | -0.01 | -0.958 |
| lignocerate | -0.163 | -1.277 |
| oleate | 0.276 | -0.839 |
| phosphatidylcholine | 0.083 | -0.903 |
| acetate | -0.286 | -1.33 |
| glucAc | -0.602 | -1.291 |
| Rv0950ko | 0.51 | 0.476 |
| Rv1096ko | -0.359 | -0.024 |
| Rv3684ko | -0.72 | 0.485 |
| delta_otsA_trehalose | -0.145 | 0.437 |