Top 10 genes with highest correlation to Rv1528c/papA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2478c/- | (cc=0.555) | info on Rv2478c/- |
| Rv1516c/- | (cc=0.5471) | info on Rv1516c/- |
| Rv0828c/- | (cc=0.4906) | info on Rv0828c/- |
| Rv1542c/glbN | (cc=0.4853) | info on Rv1542c/glbN |
| Rv0388c/PPE9 | (cc=0.4808) | info on Rv0388c/PPE9 |
| Rv1453/- | (cc=0.4547) | info on Rv1453/- |
| Rv2331/- | (cc=0.442) | info on Rv2331/- |
| Rv3103c/- | (cc=0.4399) | info on Rv3103c/- |
| Rv3368c/- | (cc=0.436) | info on Rv3368c/- |
| Rv0141c/- | (cc=0.4268) | info on Rv0141c/- |
Correlation of Rv1528c/papA4 with Rv0388c/PPE9
Normalized LFCs for Rv1528c/papA4:
(description and provenance of datasets)
| Rv1528c/papA4 | Rv0388c/PPE9 | |
| Fe_supp_jason_reseq | -1.628 | -0.923 |
| low_pH_jason_reseq | -0.105 | -0.979 |
| NO_jason_reseq | -0.73 | -0.486 |
| B6_jason_reseq | 0.215 | -0.156 |
| MHCII_jason_reseq | 1.047 | -0.299 |
| Isoniazid02 | 0.511 | 0.02 |
| Rifampicin4 | -0.341 | 0.717 |
| Ethambutol3 | 0.743 | -0.086 |
| Meropenem3 | 0.67 | 0.332 |
| Vancomycin16 | 0.308 | -0.151 |
| Rv2680_day32 | -1.157 | -2.472 |
| H37Rv_KO_MarP | -0.332 | -0.072 |
| hypoxia_3wks | -0.064 | -0.355 |
| hypoxia_6wks | -0.441 | -0.679 |
| glycerol | 0.366 | -0.762 |
| cholesterol | -0.374 | 0.03 |
| AJ | 0.526 | 1.055 |
| Bibs02 | 1.032 | 0.918 |
| Bibs02c | 0.038 | 0.694 |
| BL6 | -0.945 | -0.721 |
| BL6a | 0.489 | 0.0 |
| BXD01 | -0.135 | 0.704 |
| BXD010 | -1.142 | 0.385 |
| BXD011 | 0.387 | 0.982 |
| BXD03 | 0.058 | 0.083 |
| BXD04 | 0.733 | -0.026 |
| BXD05 | -0.206 | 0.902 |
| BXD06 | 0.214 | -0.133 |
| BXD07 | -0.436 | 0.279 |
| BXD08 | 0.119 | 0.41 |
| BXD09 | 0.164 | 0.233 |
| CAST | 0.953 | 0.711 |
| CCcont | -0.772 | -0.167 |
| DS01 | 0.695 | 1.009 |
| DS02 | -0.317 | 1.457 |
| DS04 | 1.476 | 1.279 |
| DS0c | 1.07 | 0.896 |
| GP01 | -2.152 | -0.466 |
| GP02 | -1.947 | -1.01 |
| GP0c | -2.492 | -1.716 |
| NOD | 0.937 | 2.372 |
| NZO | 0.587 | 0.961 |
| PWK | 0.685 | 0.307 |
| H37Rv_KO_CtpC | -0.191 | 1.467 |
| H37Rv_KO_CtpD | 0.853 | -0.171 |
| H37Rv_KO_Rv1272 | 0.89 | 0.905 |
| H37Rv_KO_SugABC | 0.401 | 1.027 |
| H37Rv_KO_MbtN | 0.925 | 0.557 |
| Trans05 | -0.347 | 0.762 |
| macrophage_unactivated | -0.732 | 0.527 |
| IL1 | -0.409 | 2.002 |
| Rapamycin | -0.396 | 1.82 |
| Tcell | -0.055 | 0.691 |
| GMCSF | 0.108 | 1.196 |
| IFNab | 0.193 | 1.611 |
| IFNg | -0.158 | 0.505 |
| IFNg_GMCSF1 | 0.079 | 0.996 |
| Rv1432_day32 | 0.0 | 0.343 |
| Rv1565c_day32 | 0.602 | 0.0 |
| secA2_input | 0.643 | 0.28 |
| delta_Rv3594 | -0.249 | -1.077 |
| delta_Rv3717 | -1.073 | -2.451 |
| delta_Rv3811 | -0.968 | -1.142 |
| delta_Rv0954 | -0.261 | -0.09 |
| PonA1 | -0.452 | -0.77 |
| EccD1_KO | -0.605 | -0.184 |
| EspI_KO | -0.724 | 0.419 |
| PE35_KO | 0.149 | -0.478 |
| PPE68_KO | -0.528 | -0.899 |
| glycerol2 | -0.01 | -1.135 |
| lignocerate | -0.163 | -0.84 |
| oleate | 0.276 | -0.133 |
| phosphatidylcholine | 0.083 | -0.535 |
| acetate | -0.286 | -0.306 |
| glucAc | -0.602 | -1.076 |
| Rv0950ko | 0.51 | 0.639 |
| Rv1096ko | -0.359 | 0.73 |
| Rv3684ko | -0.72 | 0.891 |
| delta_otsA_trehalose | -0.145 | -0.356 |