Top 10 genes with highest correlation to Rv1528c/papA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2478c/- | (cc=0.555) | info on Rv2478c/- |
| Rv1516c/- | (cc=0.5471) | info on Rv1516c/- |
| Rv0828c/- | (cc=0.4906) | info on Rv0828c/- |
| Rv1542c/glbN | (cc=0.4853) | info on Rv1542c/glbN |
| Rv0388c/PPE9 | (cc=0.4808) | info on Rv0388c/PPE9 |
| Rv1453/- | (cc=0.4547) | info on Rv1453/- |
| Rv2331/- | (cc=0.442) | info on Rv2331/- |
| Rv3103c/- | (cc=0.4399) | info on Rv3103c/- |
| Rv3368c/- | (cc=0.436) | info on Rv3368c/- |
| Rv0141c/- | (cc=0.4268) | info on Rv0141c/- |
Correlation of Rv1528c/papA4 with Rv0141c/-
Normalized LFCs for Rv1528c/papA4:
(description and provenance of datasets)
| Rv1528c/papA4 | Rv0141c/- | |
| Fe_supp_jason_reseq | -1.628 | -0.764 |
| low_pH_jason_reseq | -0.105 | -0.182 |
| NO_jason_reseq | -0.73 | -0.181 |
| B6_jason_reseq | 0.215 | 0.128 |
| MHCII_jason_reseq | 1.047 | 0.178 |
| Isoniazid02 | 0.511 | 0.615 |
| Rifampicin4 | -0.341 | -0.412 |
| Ethambutol3 | 0.743 | 0.303 |
| Meropenem3 | 0.67 | 0.165 |
| Vancomycin16 | 0.308 | 0.507 |
| Rv2680_day32 | -1.157 | 1.774 |
| H37Rv_KO_MarP | -0.332 | -0.591 |
| hypoxia_3wks | -0.064 | 0.032 |
| hypoxia_6wks | -0.441 | -0.733 |
| glycerol | 0.366 | -0.644 |
| cholesterol | -0.374 | -0.121 |
| AJ | 0.526 | -0.062 |
| Bibs02 | 1.032 | -0.076 |
| Bibs02c | 0.038 | 0.721 |
| BL6 | -0.945 | 0.089 |
| BL6a | 0.489 | 0.307 |
| BXD01 | -0.135 | -0.008 |
| BXD010 | -1.142 | 0.285 |
| BXD011 | 0.387 | 0.241 |
| BXD03 | 0.058 | -0.383 |
| BXD04 | 0.733 | 0.177 |
| BXD05 | -0.206 | -0.235 |
| BXD06 | 0.214 | 0.12 |
| BXD07 | -0.436 | 0.247 |
| BXD08 | 0.119 | -0.036 |
| BXD09 | 0.164 | 0.401 |
| CAST | 0.953 | 1.126 |
| CCcont | -0.772 | -0.41 |
| DS01 | 0.695 | 0.407 |
| DS02 | -0.317 | 0.77 |
| DS04 | 1.476 | 0.474 |
| DS0c | 1.07 | 1.42 |
| GP01 | -2.152 | -0.651 |
| GP02 | -1.947 | -1.98 |
| GP0c | -2.492 | -1.07 |
| NOD | 0.937 | 2.652 |
| NZO | 0.587 | 0.191 |
| PWK | 0.685 | 0.874 |
| H37Rv_KO_CtpC | -0.191 | -0.533 |
| H37Rv_KO_CtpD | 0.853 | 0.239 |
| H37Rv_KO_Rv1272 | 0.89 | 0.127 |
| H37Rv_KO_SugABC | 0.401 | 0.406 |
| H37Rv_KO_MbtN | 0.925 | -1.292 |
| Trans05 | -0.347 | -1.792 |
| macrophage_unactivated | -0.732 | -0.142 |
| IL1 | -0.409 | -0.053 |
| Rapamycin | -0.396 | -0.368 |
| Tcell | -0.055 | 0.28 |
| GMCSF | 0.108 | -0.42 |
| IFNab | 0.193 | -0.856 |
| IFNg | -0.158 | 0.118 |
| IFNg_GMCSF1 | 0.079 | 0.399 |
| Rv1432_day32 | 0.0 | 1.065 |
| Rv1565c_day32 | 0.602 | 0.599 |
| secA2_input | 0.643 | -0.977 |
| delta_Rv3594 | -0.249 | -0.315 |
| delta_Rv3717 | -1.073 | -0.467 |
| delta_Rv3811 | -0.968 | -0.828 |
| delta_Rv0954 | -0.261 | 0.194 |
| PonA1 | -0.452 | -0.643 |
| EccD1_KO | -0.605 | -0.595 |
| EspI_KO | -0.724 | 0.819 |
| PE35_KO | 0.149 | 0.44 |
| PPE68_KO | -0.528 | 0.384 |
| glycerol2 | -0.01 | 0.214 |
| lignocerate | -0.163 | -0.518 |
| oleate | 0.276 | 0.715 |
| phosphatidylcholine | 0.083 | -0.195 |
| acetate | -0.286 | -0.673 |
| glucAc | -0.602 | -1.034 |
| Rv0950ko | 0.51 | 0.033 |
| Rv1096ko | -0.359 | -0.452 |
| Rv3684ko | -0.72 | 0.072 |
| delta_otsA_trehalose | -0.145 | -0.025 |