Top 10 genes with highest correlation to Rv1528c/papA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2478c/- | (cc=0.555) | info on Rv2478c/- |
| Rv1516c/- | (cc=0.5471) | info on Rv1516c/- |
| Rv0828c/- | (cc=0.4906) | info on Rv0828c/- |
| Rv1542c/glbN | (cc=0.4853) | info on Rv1542c/glbN |
| Rv0388c/PPE9 | (cc=0.4808) | info on Rv0388c/PPE9 |
| Rv1453/- | (cc=0.4547) | info on Rv1453/- |
| Rv2331/- | (cc=0.442) | info on Rv2331/- |
| Rv3103c/- | (cc=0.4399) | info on Rv3103c/- |
| Rv3368c/- | (cc=0.436) | info on Rv3368c/- |
| Rv0141c/- | (cc=0.4268) | info on Rv0141c/- |
Correlation of Rv1528c/papA4 with Rv1516c/-
Normalized LFCs for Rv1528c/papA4:
(description and provenance of datasets)
| Rv1528c/papA4 | Rv1516c/- | |
| Fe_supp_jason_reseq | -1.628 | 0.257 |
| low_pH_jason_reseq | -0.105 | -1.027 |
| NO_jason_reseq | -0.73 | -0.601 |
| B6_jason_reseq | 0.215 | 0.712 |
| MHCII_jason_reseq | 1.047 | 1.498 |
| Isoniazid02 | 0.511 | 0.16 |
| Rifampicin4 | -0.341 | 0.043 |
| Ethambutol3 | 0.743 | 0.259 |
| Meropenem3 | 0.67 | 0.956 |
| Vancomycin16 | 0.308 | 0.085 |
| Rv2680_day32 | -1.157 | -0.913 |
| H37Rv_KO_MarP | -0.332 | 0.294 |
| hypoxia_3wks | -0.064 | -0.116 |
| hypoxia_6wks | -0.441 | -0.152 |
| glycerol | 0.366 | 0.369 |
| cholesterol | -0.374 | -1.422 |
| AJ | 0.526 | -0.044 |
| Bibs02 | 1.032 | 0.244 |
| Bibs02c | 0.038 | 0.75 |
| BL6 | -0.945 | -0.401 |
| BL6a | 0.489 | -0.057 |
| BXD01 | -0.135 | -0.383 |
| BXD010 | -1.142 | 0.048 |
| BXD011 | 0.387 | 0.376 |
| BXD03 | 0.058 | 0.448 |
| BXD04 | 0.733 | -0.073 |
| BXD05 | -0.206 | 0.84 |
| BXD06 | 0.214 | 0.109 |
| BXD07 | -0.436 | 0.339 |
| BXD08 | 0.119 | 0.494 |
| BXD09 | 0.164 | -0.041 |
| CAST | 0.953 | 0.365 |
| CCcont | -0.772 | -0.229 |
| DS01 | 0.695 | 0.648 |
| DS02 | -0.317 | -0.613 |
| DS04 | 1.476 | 1.45 |
| DS0c | 1.07 | 1.026 |
| GP01 | -2.152 | -2.127 |
| GP02 | -1.947 | -2.085 |
| GP0c | -2.492 | -2.068 |
| NOD | 0.937 | 0.835 |
| NZO | 0.587 | 0.396 |
| PWK | 0.685 | 0.523 |
| H37Rv_KO_CtpC | -0.191 | -0.031 |
| H37Rv_KO_CtpD | 0.853 | -0.037 |
| H37Rv_KO_Rv1272 | 0.89 | -0.452 |
| H37Rv_KO_SugABC | 0.401 | -1.576 |
| H37Rv_KO_MbtN | 0.925 | -0.04 |
| Trans05 | -0.347 | 0.717 |
| macrophage_unactivated | -0.732 | 0.035 |
| IL1 | -0.409 | -0.753 |
| Rapamycin | -0.396 | -0.74 |
| Tcell | -0.055 | -0.658 |
| GMCSF | 0.108 | 0.227 |
| IFNab | 0.193 | -0.571 |
| IFNg | -0.158 | -0.54 |
| IFNg_GMCSF1 | 0.079 | 0.104 |
| Rv1432_day32 | 0.0 | -0.442 |
| Rv1565c_day32 | 0.602 | 1.218 |
| secA2_input | 0.643 | 1.902 |
| delta_Rv3594 | -0.249 | -1.133 |
| delta_Rv3717 | -1.073 | -0.669 |
| delta_Rv3811 | -0.968 | -0.763 |
| delta_Rv0954 | -0.261 | 0.979 |
| PonA1 | -0.452 | -0.08 |
| EccD1_KO | -0.605 | 0.118 |
| EspI_KO | -0.724 | 0.491 |
| PE35_KO | 0.149 | 1.076 |
| PPE68_KO | -0.528 | 1.043 |
| glycerol2 | -0.01 | -0.154 |
| lignocerate | -0.163 | 0.677 |
| oleate | 0.276 | 0.0 |
| phosphatidylcholine | 0.083 | 0.497 |
| acetate | -0.286 | 0.851 |
| glucAc | -0.602 | 0.662 |
| Rv0950ko | 0.51 | -0.458 |
| Rv1096ko | -0.359 | -0.404 |
| Rv3684ko | -0.72 | 0.593 |
| delta_otsA_trehalose | -0.145 | 1.161 |