Top 10 genes with highest correlation to Rv1513/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0404/fadD30 | (cc=0.607) | info on Rv0404/fadD30 |
| Rv0913c/- | (cc=0.5375) | info on Rv0913c/- |
| Rv3504/fadE26 | (cc=0.4764) | info on Rv3504/fadE26 |
| Rv0477/- | (cc=0.4679) | info on Rv0477/- |
| Rv2892c/PPE45 | (cc=0.4592) | info on Rv2892c/PPE45 |
| Rv1564c/treX | (cc=0.4578) | info on Rv1564c/treX |
| Rv0045c/- | (cc=0.4543) | info on Rv0045c/- |
| Rv3218/- | (cc=0.45) | info on Rv3218/- |
| Rv2683/- | (cc=0.4426) | info on Rv2683/- |
| Rv3378c/- | (cc=0.4367) | info on Rv3378c/- |
Correlation of Rv1513/- with Rv3218/-
Normalized LFCs for Rv1513/-:
(description and provenance of datasets)
| Rv1513/- | Rv3218/- | |
| Fe_supp_jason_reseq | 1.725 | 0.069 |
| low_pH_jason_reseq | -0.539 | 0.626 |
| NO_jason_reseq | 1.62 | -0.039 |
| B6_jason_reseq | 0.052 | 0.103 |
| MHCII_jason_reseq | -0.72 | -0.977 |
| Isoniazid02 | -0.39 | -0.997 |
| Rifampicin4 | -0.726 | -0.479 |
| Ethambutol3 | -0.326 | -0.966 |
| Meropenem3 | -0.531 | -0.543 |
| Vancomycin16 | -0.072 | -1.167 |
| Rv2680_day32 | 0.881 | 0.234 |
| H37Rv_KO_MarP | 1.051 | 0.319 |
| hypoxia_3wks | 1.061 | 0.502 |
| hypoxia_6wks | -0.731 | 0.833 |
| glycerol | -0.992 | -0.357 |
| cholesterol | -0.568 | 0.85 |
| AJ | 0.417 | -0.338 |
| Bibs02 | 0.694 | 0.211 |
| Bibs02c | -1.808 | 0.317 |
| BL6 | -1.52 | 1.984 |
| BL6a | 1.083 | 1.934 |
| BXD01 | 0.9 | 2.36 |
| BXD010 | 0.041 | 2.075 |
| BXD011 | 1.169 | 2.479 |
| BXD03 | 0.74 | 1.262 |
| BXD04 | 0.993 | 2.489 |
| BXD05 | 1.324 | 2.15 |
| BXD06 | 0.9 | 2.326 |
| BXD07 | 1.112 | 2.605 |
| BXD08 | 1.006 | 1.872 |
| BXD09 | 0.822 | 2.198 |
| CAST | 1.26 | -0.299 |
| CCcont | -0.988 | 0.557 |
| DS01 | -0.419 | -0.2 |
| DS02 | 0.449 | 0.225 |
| DS04 | -1.677 | 0.51 |
| DS0c | -0.652 | 0.303 |
| GP01 | -0.138 | 1.142 |
| GP02 | 1.734 | 1.904 |
| GP0c | -0.86 | 1.108 |
| NOD | -1.351 | -0.586 |
| NZO | 0.845 | 1.334 |
| PWK | -1.695 | 1.225 |
| H37Rv_KO_CtpC | -1.53 | 0.148 |
| H37Rv_KO_CtpD | 1.586 | 1.334 |
| H37Rv_KO_Rv1272 | 0.877 | 1.52 |
| H37Rv_KO_SugABC | -0.933 | 1.485 |
| H37Rv_KO_MbtN | -0.183 | 2.303 |
| Trans05 | 1.088 | 1.743 |
| macrophage_unactivated | -1.474 | -0.628 |
| IL1 | -1.622 | 0.561 |
| Rapamycin | -1.197 | 0.822 |
| Tcell | -0.189 | 0.075 |
| GMCSF | -0.367 | 0.906 |
| IFNab | 0.333 | 0.045 |
| IFNg | -2.106 | 0.43 |
| IFNg_GMCSF1 | -1.549 | -0.487 |
| Rv1432_day32 | 0.0 | 0.963 |
| Rv1565c_day32 | -1.82 | -0.682 |
| secA2_input | -1.398 | 0.848 |
| delta_Rv3594 | -1.741 | -0.846 |
| delta_Rv3717 | -1.601 | 0.467 |
| delta_Rv3811 | -2.787 | -0.464 |
| delta_Rv0954 | -0.7 | -0.783 |
| PonA1 | -3.817 | -0.658 |
| EccD1_KO | -1.171 | -0.516 |
| EspI_KO | -0.776 | -1.144 |
| PE35_KO | 0.0 | -0.487 |
| PPE68_KO | -0.374 | -1.245 |
| glycerol2 | -0.388 | -0.859 |
| lignocerate | -1.431 | -1.679 |
| oleate | 0.352 | -1.16 |
| phosphatidylcholine | -0.506 | -1.931 |
| acetate | -1.553 | -0.6 |
| glucAc | -4.028 | -0.508 |
| Rv0950ko | 1.885 | 0.286 |
| Rv1096ko | 0.682 | 0.0 |
| Rv3684ko | 2.047 | 0.743 |
| delta_otsA_trehalose | 5.088 | 2.083 |