Top 10 genes with highest correlation to Rv1513/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0404/fadD30 | (cc=0.607) | info on Rv0404/fadD30 |
| Rv0913c/- | (cc=0.5375) | info on Rv0913c/- |
| Rv3504/fadE26 | (cc=0.4764) | info on Rv3504/fadE26 |
| Rv0477/- | (cc=0.4679) | info on Rv0477/- |
| Rv2892c/PPE45 | (cc=0.4592) | info on Rv2892c/PPE45 |
| Rv1564c/treX | (cc=0.4578) | info on Rv1564c/treX |
| Rv0045c/- | (cc=0.4543) | info on Rv0045c/- |
| Rv3218/- | (cc=0.45) | info on Rv3218/- |
| Rv2683/- | (cc=0.4426) | info on Rv2683/- |
| Rv3378c/- | (cc=0.4367) | info on Rv3378c/- |
Correlation of Rv1513/- with Rv0045c/-
Normalized LFCs for Rv1513/-:
(description and provenance of datasets)
| Rv1513/- | Rv0045c/- | |
| Fe_supp_jason_reseq | 1.725 | 0.309 |
| low_pH_jason_reseq | -0.539 | -0.602 |
| NO_jason_reseq | 1.62 | -0.394 |
| B6_jason_reseq | 0.052 | 1.451 |
| MHCII_jason_reseq | -0.72 | 1.068 |
| Isoniazid02 | -0.39 | -0.17 |
| Rifampicin4 | -0.726 | 0.801 |
| Ethambutol3 | -0.326 | 0.131 |
| Meropenem3 | -0.531 | 0.323 |
| Vancomycin16 | -0.072 | 0.459 |
| Rv2680_day32 | 0.881 | -0.091 |
| H37Rv_KO_MarP | 1.051 | 0.33 |
| hypoxia_3wks | 1.061 | 0.179 |
| hypoxia_6wks | -0.731 | 0.405 |
| glycerol | -0.992 | -0.521 |
| cholesterol | -0.568 | -0.524 |
| AJ | 0.417 | 0.558 |
| Bibs02 | 0.694 | 0.513 |
| Bibs02c | -1.808 | -0.823 |
| BL6 | -1.52 | 0.278 |
| BL6a | 1.083 | 0.093 |
| BXD01 | 0.9 | 0.464 |
| BXD010 | 0.041 | 1.14 |
| BXD011 | 1.169 | 0.879 |
| BXD03 | 0.74 | 0.524 |
| BXD04 | 0.993 | 0.692 |
| BXD05 | 1.324 | 1.081 |
| BXD06 | 0.9 | 1.136 |
| BXD07 | 1.112 | 0.646 |
| BXD08 | 1.006 | 0.115 |
| BXD09 | 0.822 | 0.526 |
| CAST | 1.26 | -0.2 |
| CCcont | -0.988 | -1.136 |
| DS01 | -0.419 | -0.727 |
| DS02 | 0.449 | -0.534 |
| DS04 | -1.677 | 0.013 |
| DS0c | -0.652 | -0.905 |
| GP01 | -0.138 | -0.486 |
| GP02 | 1.734 | 0.683 |
| GP0c | -0.86 | -0.287 |
| NOD | -1.351 | 0.906 |
| NZO | 0.845 | -0.019 |
| PWK | -1.695 | 1.006 |
| H37Rv_KO_CtpC | -1.53 | -0.265 |
| H37Rv_KO_CtpD | 1.586 | 0.358 |
| H37Rv_KO_Rv1272 | 0.877 | -0.636 |
| H37Rv_KO_SugABC | -0.933 | 1.325 |
| H37Rv_KO_MbtN | -0.183 | 0.083 |
| Trans05 | 1.088 | 0.116 |
| macrophage_unactivated | -1.474 | -0.871 |
| IL1 | -1.622 | -0.561 |
| Rapamycin | -1.197 | -0.396 |
| Tcell | -0.189 | 0.482 |
| GMCSF | -0.367 | -0.66 |
| IFNab | 0.333 | -0.333 |
| IFNg | -2.106 | 0.011 |
| IFNg_GMCSF1 | -1.549 | -0.383 |
| Rv1432_day32 | 0.0 | 0.228 |
| Rv1565c_day32 | -1.82 | 0.275 |
| secA2_input | -1.398 | 0.196 |
| delta_Rv3594 | -1.741 | -0.095 |
| delta_Rv3717 | -1.601 | -0.635 |
| delta_Rv3811 | -2.787 | 0.59 |
| delta_Rv0954 | -0.7 | -0.767 |
| PonA1 | -3.817 | -1.421 |
| EccD1_KO | -1.171 | -0.046 |
| EspI_KO | -0.776 | -0.125 |
| PE35_KO | 0.0 | 0.283 |
| PPE68_KO | -0.374 | 0.288 |
| glycerol2 | -0.388 | 0.298 |
| lignocerate | -1.431 | -0.212 |
| oleate | 0.352 | 0.357 |
| phosphatidylcholine | -0.506 | 0.01 |
| acetate | -1.553 | -0.022 |
| glucAc | -4.028 | -0.591 |
| Rv0950ko | 1.885 | -0.021 |
| Rv1096ko | 0.682 | 0.739 |
| Rv3684ko | 2.047 | 0.088 |
| delta_otsA_trehalose | 5.088 | 2.269 |